Pytorch implementation of PTNet for high-resolution and longitudinal infant MRI synthesis

Related tags

Deep LearningPTNet
Overview

Pyramid Transformer Net (PTNet)

Project | Paper

Pytorch implementation of PTNet for high-resolution and longitudinal infant MRI synthesis.

PTNet: A High-Resolution Infant MRI Synthesizer Based on Transformer
Xuzhe Zhang1, Xinzi He1, Jia Guo2, Nabil Ettehadi1, Natalie Aw2, David Semanek2, Jonathan Posner2, Andrew Laine1, Yun Wang2
1Columbia University Department of Biomedical Engineering, 2CUMC Department of Psychiatry

Usage and Demo

Coming Soon

Prerequisites

  • Linux
  • Python3.6
  • NVIDIA GPU (11G memory or larger) + CUDA cuDNN

Getting Started

Installation

coming soon

Testing

coming soon

Dataset

coming soon

Training

coming soon

More Training/Test Details

coming soon

Citation

If you find this useful for your research, please use the following.

@article{zhang2021ptnet,
  title={PTNet: A High-Resolution Infant MRI Synthesizer Based on Transformer},
  author={Zhang, Xuzhe and He, Xinzi and Guo, Jia and Ettehadi, Nabil and Aw, Natalie and Semanek, David and Posner, Jonathan and Laine, Andrew and Wang, Yun},
  journal={arXiv preprint arXiv:2105.13993},
  year={2021}
}

Acknowledgments

This code borrows heavily from: Tokens-to-Token ViT: Training Vision Transformers from Scratch on ImageNet, pix2pixHD, pytorch-CycleGAN-and-pix2pix.

Owner
Xuzhe Johnny Zhang
image processing; CV; deep learning; computer-assisted medical image diagnosis/interpretation
Xuzhe Johnny Zhang
GitHub Repository
Pseudo-mask Matters in Weakly-supervised Semantic Segmentation

Pseudo-mask Matters in Weakly-supervised Semantic Segmentation By Yi Li, Zhanghui Kuang, Liyang Liu, Yimin Chen, Wayne Zhang SenseTime, Tsinghua Unive

33 Oct 14, 2022
Official PyTorch Code of GrooMeD-NMS: Grouped Mathematically Differentiable NMS for Monocular 3D Object Detection (CVPR 2021)

GrooMeD-NMS: Grouped Mathematically Differentiable NMS for Monocular 3D Object Detection GrooMeD-NMS: Grouped Mathematically Differentiable NMS for Mo

Abhinav Kumar 76 Jan 02, 2023
A repository for storing njxzc final exam review material

文档地址，请戳我 👈 👈 👈 ☀️ 1.Reason 大三上期末复习软件工程的时候，发现其他高校在GitHub上开源了他们学校的期末试题，我很受触动。期末

GuJiakai 2 Jan 18, 2022
Bio-OFC gym implementation and Gym-Fly environment

Bio-OFC gym implementation and Gym-Fly environment This repository includes the gym compatible implementation of the Bio-OFC algorithm from the paper

Siavash Golkar 1 Nov 16, 2021
PyTorch Implementation of PIXOR: Real-time 3D Object Detection from Point Clouds

PIXOR: Real-time 3D Object Detection from Point Clouds This is a custom implementation of the paper from Uber ATG using PyTorch 1.0. It represents the

Philip Huang 270 Dec 14, 2022
AISTATS 2019: Confidence-based Graph Convolutional Networks for Semi-Supervised Learning

Confidence-based Graph Convolutional Networks for Semi-Supervised Learning Source code for AISTATS 2019 paper: Confidence-based Graph Convolutional Ne

MALL Lab (IISc) 56 Dec 03, 2022
PyTorch implementation of SmoothGrad: removing noise by adding noise.

SmoothGrad implementation in PyTorch PyTorch implementation of SmoothGrad: removing noise by adding noise. Vanilla Gradients SmoothGrad Guided backpro

SSKH 143 Jan 05, 2023
Semi-Supervised Semantic Segmentation via Adaptive Equalization Learning, NeurIPS 2021 (Spotlight)

Semi-Supervised Semantic Segmentation via Adaptive Equalization Learning, NeurIPS 2021 (Spotlight) Abstract Due to the limited and even imbalanced dat

Hanzhe Hu 99 Dec 12, 2022
Official Implementation of "LUNAR: Unifying Local Outlier Detection Methods via Graph Neural Networks"

LUNAR Official Implementation of "LUNAR: Unifying Local Outlier Detection Methods via Graph Neural Networks" Adam Goodge, Bryan Hooi, Ng See Kiong and

Adam Goodge 25 Dec 28, 2022
A library of extension and helper modules for Python's data analysis and machine learning libraries.

Mlxtend (machine learning extensions) is a Python library of useful tools for the day-to-day data science tasks. Sebastian Raschka 2014-2020 Links Doc

Sebastian Raschka 4.2k Jan 02, 2023
This is a project based on ConvNets used to identify whether a road is clean or dirty. We have used MobileNet as our base architecture and the weights are based on imagenet.

PROJECT TITLE: CLEAN/DIRTY ROAD DETECTION USING TRANSFER LEARNING Description: This is a project based on ConvNets used to identify whether a road is

Faizal Karim 3 Nov 06, 2022
Trafffic prediction analysis using hybrid models - Machine Learning

Hybrid Machine learning Model Clone the Repository Create a new Directory as assests and download the model from the below link Model Link To Start th

1 Feb 08, 2022
Guided Internet-delivered Cognitive Behavioral Therapy Adherence Forecasting

Guided Internet-delivered Cognitive Behavioral Therapy Adherence Forecasting #Dataset The folder "Dataset" contains the dataset use in this work and m

0 Jan 08, 2022
RSNA Intracranial Hemorrhage Detection with python

RSNA Intracranial Hemorrhage Detection This is the source code for the first place solution to the RSNA2019 Intracranial Hemorrhage Detection Challeng

24 Nov 30, 2022
Relative Uncertainty Learning for Facial Expression Recognition

Relative Uncertainty Learning for Facial Expression Recognition The official implementation of the following paper at NeurIPS2021: Title: Relative Unc

35 Dec 28, 2022
Python implementation of O-OFDMNet, a deep learning-based optical OFDM system,

O-OFDMNet This includes Python implementation of O-OFDMNet, a deep learning-based optical OFDM system, which uses neural networks for signal processin

Thien Luong 4 Sep 09, 2022
Event-forecasting - Event Forecasting Algorithms With Python

event-forecasting Event Forecasting Algorithms Theory Correlating events in comp

Intellia ICT 4 Feb 15, 2022
TensorLight - A high-level framework for TensorFlow

TensorLight is a high-level framework for TensorFlow-based machine intelligence applications. It reduces boilerplate code and enables advanced feature

Benjamin Kan 10 Jul 31, 2022
Source code of our TTH paper: Targeted Trojan-Horse Attacks on Language-based Image Retrieval.

Targeted Trojan-Horse Attacks on Language-based Image Retrieval Source code of our TTH paper: Targeted Trojan-Horse Attacks on Language-based Image Re

fine 7 Aug 23, 2022
Unsupervised CNN for Single View Depth Estimation: Geometry to the Rescue

Realtime Unsupervised Depth Estimation from an Image This is the caffe implementation of our paper "Unsupervised CNN for single view depth estimation:

Ravi Garg 227 Nov 28, 2022