DCSAU-Net: A Deeper and More Compact Split-Attention U-Net for Medical Image Segmentation

Related tags

Deep LearningDCSAU-Net
Overview

DCSAU-Net: A Deeper and More Compact Split-Attention U-Net for Medical Image Segmentation

By Qing Xu, Wenting Duan and Na He

Requirements

  1. pytorch==1.10.0
  2. pytorch-lightning==1.1.0
  3. albumentations==0.3.2
  4. seaborn
  5. sklearn

Dataset

To apply the model on a custom dataset, the data tree should be constructed as:

    ├── data
          ├── images
                ├── image_1.png
                ├── image_2.png
                ├── image_n.png
          ├── masks
                ├── image_1.png
                ├── image_2.png
                ├── image_n.png

CSV generation

python data_split_csv.py --dataset your/data/path --size 0.9

Train

python train.py --dataset your/data/path --csvfile your/csv/path --loss dice --batch 16 --lr 0.001 --epoch 150

Evaluation

python eval_binary.py --dataset your/data/path --csvfile your/csv/path --model save_models/epoch_last.pth --debug True

Acknowledgement

The codes are modified from ResNeSt, U-Net

Owner
Qing Xu
Qing Xu
GitHub Repository
A unified 3D Transformer Pipeline for visual synthesis

Overview This is the official repo for the paper: "NÜWA: Visual Synthesis Pre-training for Neural visUal World creAtion". NÜWA is a unified multimodal

Microsoft 2.6k Jan 03, 2023
4th place solution to datafactory challenge by Intermarché.

Solution to Datafactory challenge by Intermarché. 4th place solution to datafactory challenge by Intermarché. The objective of the challenge is to pre

Raphael Sourty 11 Mar 19, 2022
Some bravo or inspiring research works on the topic of curriculum learning.

Towards Scalable Unpaired Virtual Try-On via Patch-Routed Spatially-Adaptive GAN Official code for NeurIPS 2021 paper "Towards Scalable Unpaired Virtu

131 Jan 07, 2023
Multi-Stage Episodic Control for Strategic Exploration in Text Games

XTX: eXploit - Then - eXplore Requirements First clone this repo using git clone https://github.com/princeton-nlp/XTX.git Please create two conda envi

Princeton Natural Language Processing 9 May 24, 2022
Seq2seq - Sequence to Sequence Learning with Keras

Seq2seq Sequence to Sequence Learning with Keras Hi! You have just found Seq2Seq. Seq2Seq is a sequence to sequence learning add-on for the python dee

Fariz Rahman 3.1k Dec 18, 2022
Using Python to Play Cyberpunk 2077

CyberPython 2077 Using Python to Play Cyberpunk 2077 This repo will contain code from the Cyberpython 2077 video series on Youtube (youtube.

Harrison 118 Oct 18, 2022
SlotRefine: A Fast Non-Autoregressive Model forJoint Intent Detection and Slot Filling

SlotRefine: A Fast Non-Autoregressive Model for Joint Intent Detection and Slot Filling Reference Main paper to be cited (Di Wu et al., 2020) @article

Moore 34 Nov 03, 2022
🛠️ SLAMcore SLAM Utilities

slamcore_utils Description This repo contains the slamcore-setup-dataset script. It can be used for installing a sample dataset for offline testing an

SLAMcore 7 Aug 04, 2022
[ACMMM 2021 Oral] Enhanced Invertible Encoding for Learned Image Compression

InvCompress Official Pytorch Implementation for "Enhanced Invertible Encoding for Learned Image Compression", ACMMM 2021 (Oral) Figure: Our framework

96 Nov 30, 2022
Making a music video with Wav2CLIP and VQGAN-CLIP

music2video Overview A repo for making a music video with Wav2CLIP and VQGAN-CLIP. The base code was derived from VQGAN-CLIP The CLIP embedding for au

Joel Jang | 장요엘 163 Dec 26, 2022
Binary classification for arrythmia detection with ECG datasets.

HEART DISEASE AI DATATHON 2021 [Eng] / [Kor] #English This is an AI diagnosis modeling contest that uses the heart disease echocardiography and electr

HY_Kim 3 Jul 14, 2022
Open source implementation of "A Self-Supervised Descriptor for Image Copy Detection" (SSCD).

A Self-Supervised Descriptor for Image Copy Detection (SSCD) This is the open-source codebase for "A Self-Supervised Descriptor for Image Copy Detecti

Meta Research 68 Jan 04, 2023
Instance-Dependent Partial Label Learning

Instance-Dependent Partial Label Learning Installation pip install -r requirements.txt Run the Demo benchmark-random mnist python -u main.py --gpu 0 -

17 Dec 29, 2022
Implementation of our paper 'RESA: Recurrent Feature-Shift Aggregator for Lane Detection' in AAAI2021.

RESA PyTorch implementation of the paper "RESA: Recurrent Feature-Shift Aggregator for Lane Detection". Our paper has been accepted by AAAI2021. Intro

137 Jan 02, 2023
Code accompanying "Learning What To Do by Simulating the Past", ICLR 2021.

Learning What To Do by Simulating the Past This repository contains code that implements the Deep Reward Learning by Simulating the Past (Deep RSLP) a

Center for Human-Compatible AI 24 Aug 07, 2021
ML-Ensemble – high performance ensemble learning

A Python library for high performance ensemble learning ML-Ensemble combines a Scikit-learn high-level API with a low-level computational graph framew

Sebastian Flennerhag 764 Dec 31, 2022
BTC-Generator - BTC Generator With Python

Что такое BTC-Generator? Это генератор чеков всеми любимого @BTC_BANKER_BOT Для

DoomGod 3 Aug 24, 2022
Unofficial pytorch implementation of 'Image Inpainting for Irregular Holes Using Partial Convolutions'

pytorch-inpainting-with-partial-conv Official implementation is released by the authors. Note that this is an ongoing re-implementation and I cannot f

Naoto Inoue 525 Jan 01, 2023
​ This is the Pytorch implementation of Progressive Attentional Manifold Alignment.

PAMA This is the Pytorch implementation of Progressive Attentional Manifold Alignment. Requirements python 3.6 pytorch 1.2.0+ PIL, numpy, matplotlib C

98 Nov 15, 2022
A general-purpose encoder-decoder framework for Tensorflow

READ THE DOCUMENTATION CONTRIBUTING A general-purpose encoder-decoder framework for Tensorflow that can be used for Machine Translation, Text Summariz

Google 5.5k Jan 07, 2023