Animate molecular orbital transitions using Psi4 and Blender

Related tags

Deep LearningMOT
Overview

Molecular Orbital Transitions (MOT)

Animate molecular orbital transitions using Psi4 and Blender

Author: Maximilian Paradiz Dominguez, University of Amsterdam

Given a molecule, it will generate an animation depicting the wave function of an electron as it undergoes a Rabi cycle that moves the electron from one orbital into another. This can be useful for obtaining a visual representation of a simple electronic excitation in which the first excited state is well described by a single configuration, such as a HOMO -> LUMO transition.

This small program is meant to be an educational tool. It is written in a way that should allow you to adapt it to your particular needs. This program depends only on FOSS software.

Dependencies

Python

Psi4

Blender

FFmpeg

Python libraries:

numpy

scikit-image

Leibniz is a python package which provide facilities to express learnable partial differential equations with PyTorch

Leibniz is a python package which provide facilities to express learnable partial differential equations with PyTorch

Beijing ColorfulClouds Technology Co.,Ltd. 16 Aug 07, 2022
torchsummaryDynamic: support real FLOPs calculation of dynamic network or user-custom PyTorch ops

torchsummaryDynamic Improved tool of torchsummaryX. torchsummaryDynamic support real FLOPs calculation of dynamic network or user-custom PyTorch ops.

Bohong Chen 1 Jan 07, 2022
Authors implementation of LieTransformer: Equivariant Self-Attention for Lie Groups

LieTransformer This repository contains the implementation of the LieTransformer used for experiments in the paper LieTransformer: Equivariant self-at

35 Oct 18, 2022
PyTorch implementation of paper “Unbiased Scene Graph Generation from Biased Training”

A new codebase for popular Scene Graph Generation methods (2020). Visualization & Scene Graph Extraction on custom images/datasets are provided. It's also a PyTorch implementation of paper “Unbiased

Kaihua Tang 824 Jan 03, 2023
Kaggle Lyft Motion Prediction for Autonomous Vehicles 4th place solution

Lyft Motion Prediction for Autonomous Vehicles Code for the 4th place solution of Lyft Motion Prediction for Autonomous Vehicles on Kaggle. Discussion

44 Jun 27, 2022
PyExplainer: A Local Rule-Based Model-Agnostic Technique (Explainable AI)

PyExplainer PyExplainer is a local rule-based model-agnostic technique for generating explanations (i.e., why a commit is predicted as defective) of J

AI Wizards for Software Management (AWSM) Research Group 14 Nov 13, 2022
(NeurIPS 2021) Pytorch implementation of paper "Re-ranking for image retrieval and transductive few-shot classification"

SSR (NeurIPS 2021) Pytorch implementation of paper "Re-ranking for image retrieval and transductivefew-shot classification" [Paper] [Project webpage]

xshen 29 Dec 06, 2022
Adversarial Color Enhancement: Generating Unrestricted Adversarial Images by Optimizing a Color Filter

ACE Please find the preliminary version published at BMVC 2020 in the folder BMVC_version, and its extended journal version in Journal_version. Datase

28 Dec 25, 2022
Python scripts form performing stereo depth estimation using the HITNET model in Tensorflow Lite.

TFLite-HITNET-Stereo-depth-estimation Python scripts form performing stereo depth estimation using the HITNET model in Tensorflow Lite. Stereo depth e

Ibai Gorordo 22 Oct 20, 2022
This is the official Pytorch-version code of FlatGCN (Flattened Graph Convolutional Networks for Recommendation).

FlatGCN This is the official Pytorch-version code of FlatGCN (Flattened Graph Convolutional Networks for Recommendation, submitted to ICASSP2022). Req

Dreamer 2 Aug 09, 2022
PULSE: Self-Supervised Photo Upsampling via Latent Space Exploration of Generative Models

PULSE: Self-Supervised Photo Upsampling via Latent Space Exploration of Generative Models Code accompanying CVPR'20 paper of the same title. Paper lin

Alex Damian 7k Dec 30, 2022
Send text to girlfriend in the morning

Girlfriend Text Send text to girlfriend (or really anyone with a phone number) in the morning 1. Configure your settings in utils.py. phone_number = "

Paras Adhikary 199 Oct 25, 2022
AOT (Associating Objects with Transformers) in PyTorch

An efficient modular implementation of Associating Objects with Transformers for Video Object Segmentation in PyTorch

162 Dec 14, 2022
Open source code for Paper "A Co-Interactive Transformer for Joint Slot Filling and Intent Detection"

A Co-Interactive Transformer for Joint Slot Filling and Intent Detection This repository contains the PyTorch implementation of the paper: A Co-Intera

67 Dec 05, 2022
Optimized Gillespie algorithm for simulating Stochastic sPAtial models of Cancer Evolution (OG-SPACE)

OG-SPACE Introduction Optimized Gillespie algorithm for simulating Stochastic sPAtial models of Cancer Evolution (OG-SPACE) is a computational framewo

Data and Computational Biology Group UNIMIB (was BI*oinformatics MI*lan B*icocca) 0 Nov 17, 2021
《Geo Word Clouds》paper implementation

《Geo Word Clouds》paper implementation

Russellwzr 2 Jan 28, 2022
Towers of Babel: Combining Images, Language, and 3D Geometry for Learning Multimodal Vision. ICCV 2021.

Towers of Babel: Combining Images, Language, and 3D Geometry for Learning Multimodal Vision Download links and PyTorch implementation of "Towers of Ba

Blakey Wu 40 Dec 14, 2022
Label Mask for Multi-label Classification

LM-MLC 一种基于完型填空的多标签分类算法 1 前言 本文主要介绍本人在全球人工智能技术创新大赛【赛道一】设计的一种基于完型填空(模板)的多标签分类算法:LM-MLC,该算法拟合能力很强能感知标签关联性,在多个数据集上测试表明该算法与主流算法无显著性差异,在该比赛数据集上的dev效果很好,但是由

52 Nov 20, 2022
Madanalysis5 - A package for event file analysis and recasting of LHC results

Welcome to MadAnalysis 5 Outline What is MadAnalysis 5? Requirements Downloading

MadAnalysis 15 Jan 01, 2023
constructing maps of intellectual influence from publication data

Influencemap Project @ ANU Influence in the academic communities has been an area of interest for researchers. This can be seen in the popularity of a

CS Metrics 13 Jun 18, 2022