An attempt at the implementation of GLOM, Geoffrey Hinton's paper for emergent part-whole hierarchies from data

Overview

GLOM TensorFlow Twitter

PyPI Flake8 Lint Upload Python Package Python Version

Binder Open In Colab

GitHub license PEP8 GitHub stars GitHub followers Twitter Follow

This Python package attempts to implement GLOM in TensorFlow, which allows advances made by several different groups transformers, neural fields, contrastive representation learning, distillation and capsules to be combined. This was suggested by Geoffrey Hinton in his paper "How to represent part-whole hierarchies in a neural network".

Further, Yannic Kilcher's video and Phil Wang's repo was very helpful for me to implement this project.

Installation

Run the following to install:

pip install glom-tf

Developing glom-tf

To install glom-tf, along with tools you need to develop and test, run the following in your virtualenv:

git clone https://github.com/Rishit-dagli/GLOM-TensorFlow.git
# or clone your own fork

cd GLOM-TensorFlow
pip install -e .[dev]

A bit about GLOM

The GLOM architecture is composed of a large number of columns which all use exactly the same weights. Each column is a stack of spatially local autoencoders that learn multiple levels of representation for what is happening in a small image patch. Each autoencoder transforms the embedding at one level into the embedding at an adjacent level using a multilayer bottom-up encoder and a multilayer top-down decoder. These levels correspond to the levels in a part-whole hierarchy.

Interactions among the 3 levels in one column

An example shared by the author was as an example when show a face image, a single column might converge on embedding vectors representing a nostril, a nose, a face, and a person.

At each discrete time and in each column separately, the embedding at a level is updated to be the weighted average of:

  • bottom-up neural net acting on the embedding at the level below at the previous time
  • top-down neural net acting on the embedding at the level above at the previous time
  • embedding vector at the previous time step
  • attention-weighted average of the embeddings at the same level in nearby columns at the previous time

For a static image, the embeddings at a level should settle down over time to produce similar vectors.

A picture of the embeddings at a particular time

Usage

from glomtf import Glom

model = Glom(dim = 512,
             levels = 5,
             image_size = 224,
             patch_size = 14)

img = tf.random.normal([1, 3, 224, 224])
levels = model(img, iters = 12) # (1, 256, 5, 12)
# 1 - batch
# 256 - patches
# 5 - levels
# 12 - dimensions

Use the return_all = True argument to get all the column and level states per iteration. This also gives you access to all the level data across iterations for clustering, from which you can inspect the islands too.

from glomtf import Glom

model = Glom(dim = 512,
             levels = 5,
             image_size = 224,
             patch_size = 14)

img = tf.random.normal([1, 3, 224, 224])
all_levels = model(img, iters = 12, return_all = True) # (13, 1, 256, 5, 12)
# 13 - time

# top level outputs after iteration 6
top_level_output = all_levels[7, :, :, -1] # (1, 256, 512)
# 1 - batch
# 256 - patches
# 512 - dimensions

Want to Contribute πŸ™‹β€β™‚οΈ ?

Awesome! If you want to contribute to this project, you're always welcome! See Contributing Guidelines. You can also take a look at open issues for getting more information about current or upcoming tasks.

Want to discuss? πŸ’¬

Have any questions, doubts or want to present your opinions, views? You're always welcome. You can start discussions.

Citations

@misc{hinton2021represent,
    title   = {How to represent part-whole hierarchies in a neural network}, 
    author  = {Geoffrey Hinton},
    year    = {2021},
    eprint  = {2102.12627},
    archivePrefix = {arXiv},
    primaryClass = {cs.CV}
}

License

Copyright 2020 Rishit Dagli

Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the License.
You may obtain a copy of the License at

    http://www.apache.org/licenses/LICENSE-2.0

Unless required by applicable law or agreed to in writing, software
distributed under the License is distributed on an "AS IS" BASIS,
WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
See the License for the specific language governing permissions and
limitations under the License.
You might also like...
Deep Multi-Magnification Network for multi-class tissue segmentation of whole slide images
Deep Multi-Magnification Network for multi-class tissue segmentation of whole slide images

Deep Multi-Magnification Network This repository provides training and inference codes for Deep Multi-Magnification Network published here. Deep Multi

The official implementation of the CVPR 2021 paper FAPIS: a Few-shot Anchor-free Part-based Instance Segmenter
The official implementation of the CVPR 2021 paper FAPIS: a Few-shot Anchor-free Part-based Instance Segmenter

FAPIS The official implementation of the CVPR 2021 paper FAPIS: a Few-shot Anchor-free Part-based Instance Segmenter Introduction This repo is primari

Utility tools for the
Utility tools for the "Divide and Remaster" dataset, introduced as part of the Cocktail Fork problem paper

Divide and Remaster Utility Tools Utility tools for the "Divide and Remaster" dataset, introduced as part of the Cocktail Fork problem paper The DnR d

Part-Aware Data Augmentation for 3D Object Detection in Point Cloud
Part-Aware Data Augmentation for 3D Object Detection in Point Cloud

Part-Aware Data Augmentation for 3D Object Detection in Point Cloud This repository contains a reference implementation of our Part-Aware Data Augment

Pytorch implementation of Each Part Matters: Local Patterns Facilitate Cross-view Geo-localization https://arxiv.org/abs/2008.11646
Pytorch implementation of Each Part Matters: Local Patterns Facilitate Cross-view Geo-localization https://arxiv.org/abs/2008.11646

[TCSVT] Each Part Matters: Local Patterns Facilitate Cross-view Geo-localization LPN [Paper] NEWs Prerequisites Python 3.6 GPU Memory = 8G Numpy 1.

Towards Part-Based Understanding of RGB-D Scans
Towards Part-Based Understanding of RGB-D Scans

Towards Part-Based Understanding of RGB-D Scans (CVPR 2021) We propose the task of part-based scene understanding of real-world 3D environments: from

Kaggle | 9th place (part of) solution for the Bristol-Myers Squibb – Molecular Translation challenge

Part of the 9th place solution for the Bristol-Myers Squibb – Molecular Translation challenge translating images containing chemical structures into I

TorchIO is a Medical image preprocessing and augmentation toolkit for deep learning. Part of the PyTorch Ecosystem.
TorchIO is a Medical image preprocessing and augmentation toolkit for deep learning. Part of the PyTorch Ecosystem.

Medical image preprocessing and augmentation toolkit for deep learning. Part of the PyTorch Ecosystem.

Created as part of CS50 AI's coursework. This AI makes use of knowledge entailment to calculate the best probabilities to win Minesweeper.
Created as part of CS50 AI's coursework. This AI makes use of knowledge entailment to calculate the best probabilities to win Minesweeper.

Minesweeper-AI Created as part of CS50 AI's coursework. This AI makes use of knowledge entailment to calculate the best probabilities to win Minesweep

Comments
Releases(v0.1.1)
Owner
Rishit Dagli
High School,TEDx,2xTED-Ed speaker | International Speaker | Microsoft Student Ambassador | Mentor, @TFUGMumbai | Organize @KotlinMumbai
Rishit Dagli
Air Quality Prediction Using LSTM

AirQualityPredictionUsingLSTM In this Repo, i present to you the winning solution of smart gujarat hackathon 2019 where the task was to predict the qu

Deepak Nandwani 2 Dec 13, 2022
A big endian Gentoo port developed on a Pine64.org RockPro64

Gentoo-aarch64_be A big endian Gentoo port developed on a Pine64.org RockPro64 The endian wars are over... little endian won. As a result, it is incre

Rory Bolt 6 Dec 07, 2022
A toolset of Python programs for signal modeling and indentification via sparse semilinear autoregressors.

SPAAR Description A toolset of Python programs for signal modeling via sparse semilinear autoregressors. References Vides, F. (2021). Computing Semili

Fredy Vides 0 Oct 30, 2021
Classification of ecg datas for disease detection

ecg_classification Classification of ecg datas for disease detection

Atacan Γ–ZKAN 5 Sep 09, 2022
Lightweight Python library for adding real-time object tracking to any detector.

Norfair is a customizable lightweight Python library for real-time 2D object tracking. Using Norfair, you can add tracking capabilities to any detecto

Tryolabs 1.7k Jan 05, 2023
PyTorch Autoencoders - Implementing a Variational Autoencoder (VAE) Series in Pytorch.

PyTorch Autoencoders Implementing a Variational Autoencoder (VAE) Series in Pytorch. Inspired by this repository Model List check model paper conferen

Subin An 8 Nov 21, 2022
Package for working with hypernetworks in PyTorch.

Package for working with hypernetworks in PyTorch.

Christian Henning 71 Jan 05, 2023
NATS-Bench: Benchmarking NAS Algorithms for Architecture Topology and Size

NATS-Bench: Benchmarking NAS Algorithms for Architecture Topology and Size Xuanyi Dong, Lu Liu, Katarzyna Musial, Bogdan Gabrys in IEEE Transactions o

D-X-Y 137 Dec 20, 2022
A flexible and extensible framework for gait recognition.

A flexible and extensible framework for gait recognition. You can focus on designing your own models and comparing with state-of-the-arts easily with the help of OpenGait.

Shiqi Yu 335 Dec 22, 2022
πŸ† The 1st Place Submission to AICity Challenge 2021 Natural Language-Based Vehicle Retrieval Track (Alibaba-UTS submission)

AI City 2021: Connecting Language and Vision for Natural Language-Based Vehicle Retrieval πŸ† The 1st Place Submission to AICity Challenge 2021 Natural

82 Dec 29, 2022
GraphRNN: Generating Realistic Graphs with Deep Auto-regressive Models

GraphRNN: Generating Realistic Graphs with Deep Auto-regressive Model This repository is the official PyTorch implementation of GraphRNN, a graph gene

Jiaxuan 568 Dec 29, 2022
Waymo motion prediction challenge 2021: 3rd place solution

Waymo motion prediction challenge 2021: 3rd place solution πŸ“œ Technical report πŸ—¨οΈ Presentation πŸŽ‰ Announcement πŸ›†Motion Prediction Channel Website πŸ›†

158 Jan 08, 2023
ZeroVL - The official implementation of ZeroVL

This repository contains source code necessary to reproduce the results presente

31 Nov 04, 2022
September-Assistant - Open-source Windows Voice Assistant

September - Windows Assistant September is an open-source Windows personal assis

The Nithin Balaji 9 Nov 22, 2022
PiRank: Learning to Rank via Differentiable Sorting

PiRank: Learning to Rank via Differentiable Sorting This repository provides a reference implementation for learning PiRank-based models as described

54 Dec 17, 2022
A Pytorch implement of paper "Anomaly detection in dynamic graphs via transformer" (TADDY).

TADDY: Anomaly detection in dynamic graphs via transformer This repo covers an reference implementation for the paper "Anomaly detection in dynamic gr

Yue Tan 21 Nov 24, 2022
Learning Dense Representations of Phrases at Scale (Lee et al., 2020)

DensePhrases DensePhrases provides answers to your natural language questions from the entire Wikipedia in real-time. While it efficiently searches th

Princeton Natural Language Processing 540 Dec 30, 2022
Library for fast text representation and classification.

fastText fastText is a library for efficient learning of word representations and sentence classification. Table of contents Resources Models Suppleme

Facebook Research 24.1k Jan 01, 2023
Propose a principled and practically effective framework for unsupervised accuracy estimation and error detection tasks with theoretical analysis and state-of-the-art performance.

Detecting Errors and Estimating Accuracy on Unlabeled Data with Self-training Ensembles This project is for the paper: Detecting Errors and Estimating

Jiefeng Chen 13 Nov 21, 2022
SSD: A Unified Framework for Self-Supervised Outlier Detection [ICLR 2021]

SSD: A Unified Framework for Self-Supervised Outlier Detection [ICLR 2021] Pdf: https://openreview.net/forum?id=v5gjXpmR8J Code for our ICLR 2021 pape

Princeton INSPIRE Research Group 113 Nov 27, 2022