A Protein-RNA Interface Predictor Based on Semantics of Sequences

Related tags

Deep LearningPRIP
Overview

PRIP

PRIP:A Protein-RNA Interface Predictor Based on Semantics of Sequences

image

installation

  • gensim==3.8.3
  • matplotlib==3.1.3
  • xgboost==1.3.3
  • prettytable==2.0.0
  • mkl-random==1.1.0
  • numpy==1.19.5
  • seaborn==0.10.0
  • sklearn==0.24.0

Data:

http://ailab-projects2.ist.psu.edu/RNABindRPlus/data.html

Run:

  • step 1: pyrhon Extracting semantic features.py
  • step 2: python PRIP_main.py
Owner
李优
李优
💡 Type hints for Numpy

Type hints with dynamic checks for Numpy! (❒) Installation pip install nptyping (❒) Usage (❒) NDArray nptyping.NDArray lets you define the shape and

Ramon Hagenaars 377 Dec 28, 2022
The all new way to turn your boring vector meshes into the new fad in town; Voxels!

Voxelator The all new way to turn your boring vector meshes into the new fad in town; Voxels! Notes: I have not tested this on a rotated mesh. With fu

6 Feb 03, 2022
Source code of CIKM2021 Long Paper "PSSL: Self-supervised Learning for Personalized Search with Contrastive Sampling".

PSSL Source code of CIKM2021 Long Paper "PSSL: Self-supervised Learning for Personalized Search with Contrastive Sampling". It consists of the pre-tra

2 Dec 21, 2021
A robust pointcloud registration pipeline based on correlation.

PHASER: A Robust and Correspondence-Free Global Pointcloud Registration Ubuntu 18.04+ROS Melodic: Overview Pointcloud registration using correspondenc

ETHZ ASL 101 Dec 01, 2022
CLOOB: Modern Hopfield Networks with InfoLOOB Outperform CLIP

CLOOB: Modern Hopfield Networks with InfoLOOB Outperform CLIP Andreas Fürst* 1, Elisabeth Rumetshofer* 1, Viet Tran1, Hubert Ramsauer1, Fei Tang3, Joh

Institute for Machine Learning, Johannes Kepler University Linz 133 Jan 04, 2023
LyaNet: A Lyapunov Framework for Training Neural ODEs

LyaNet: A Lyapunov Framework for Training Neural ODEs Provide the model type--config-name to train and test models configured as those shown in the pa

Ivan Dario Jimenez Rodriguez 21 Nov 21, 2022
Implementation of Hierarchical Transformer Memory (HTM) for Pytorch

Hierarchical Transformer Memory (HTM) - Pytorch Implementation of Hierarchical Transformer Memory (HTM) for Pytorch. This Deepmind paper proposes a si

Phil Wang 63 Dec 29, 2022
🔥RandLA-Net in Tensorflow (CVPR 2020, Oral & IEEE TPAMI 2021)

RandLA-Net: Efficient Semantic Segmentation of Large-Scale Point Clouds (CVPR 2020) This is the official implementation of RandLA-Net (CVPR2020, Oral

Qingyong 1k Dec 30, 2022
Explaining Hyperparameter Optimization via PDPs

Explaining Hyperparameter Optimization via PDPs This repository gives access to an implementation of the methods presented in the paper submission “Ex

2 Nov 16, 2022
A deep learning network built with TensorFlow and Keras to classify gender and estimate age.

Convolutional Neural Network (CNN). This repository contains a source code of a deep learning network built with TensorFlow and Keras to classify gend

Pawel Dziemiach 1 Dec 18, 2021
Official implementation of "Open-set Label Noise Can Improve Robustness Against Inherent Label Noise" (NeurIPS 2021)

Open-set Label Noise Can Improve Robustness Against Inherent Label Noise NeurIPS 2021: This repository is the official implementation of ODNL. Require

Hongxin Wei 12 Dec 07, 2022
AniGAN: Style-Guided Generative Adversarial Networks for Unsupervised Anime Face Generation

AniGAN: Style-Guided Generative Adversarial Networks for Unsupervised Anime Face Generation AniGAN: Style-Guided Generative Adversarial Networks for U

Bing Li 81 Dec 14, 2022
Structure-Preserving Deraining with Residue Channel Prior Guidance (ICCV2021)

SPDNet Structure-Preserving Deraining with Residue Channel Prior Guidance (ICCV2021) Requirements Linux Platform NVIDIA GPU + CUDA CuDNN PyTorch == 0.

41 Dec 12, 2022
Randstad Artificial Intelligence Challenge (powered by VGEN). Soluzione proposta da Stefano Fiorucci (anakin87) - primo classificato

Randstad Artificial Intelligence Challenge (powered by VGEN) Soluzione proposta da Stefano Fiorucci (anakin87) - primo classificato Struttura director

Stefano Fiorucci 1 Nov 13, 2021
Lite-HRNet: A Lightweight High-Resolution Network

LiteHRNet Benchmark 🔥 🔥 Based on MMsegmentation 🔥 🔥 Cityscapes FCN resize concat config mIoU last mAcc last eval last mIoU best mAcc best eval bes

16 Dec 12, 2022
Viperdb - A tiny log-structured key-value database written in pure Python

ViperDB 🐍 ViperDB is a lightweight embedded key-value store written in pure Pyt

17 Oct 17, 2022
CVPR 2021: "The Spatially-Correlative Loss for Various Image Translation Tasks"

Spatially-Correlative Loss arXiv | website We provide the Pytorch implementation of "The Spatially-Correlative Loss for Various Image Translation Task

Chuanxia Zheng 89 Jan 04, 2023
Hyperparameter tuning for humans

KerasTuner KerasTuner is an easy-to-use, scalable hyperparameter optimization framework that solves the pain points of hyperparameter search. Easily c

Keras 2.6k Dec 27, 2022
Fortuitous Forgetting in Connectionist Networks

Fortuitous Forgetting in Connectionist Networks Introduction This repository includes reference code for the paper Fortuitous Forgetting in Connection

Hattie Zhou 14 Nov 26, 2022
BookMyShowPC - Movie Ticket Reservation App made with Tkinter

Book My Show PC What is this? Movie Ticket Reservation App made with Tkinter. Tk

The Nithin Balaji 3 Dec 09, 2022