Simple mathematical operations on image, point and surface layers.

Last update: Jan 18, 2022

Related tags

Image Processing napari-math

Overview

napari-math

$tests$

This package provides a GUI interfrace for simple mathematical operations on image, point and surface layers.

addition
subtraction
multiplication
division
logical and, or, xor
z-projection (mean and sum)

Operations can be peformed on a single layer or between Image layers (functionaly pending for Surface and Point layers), for example adding one layer to another.

When performing operations on two images of different sizes, the result will be the size of the smallest of the two images.

Installation

You can install napari-math via pip:

pip install napari-math

Contributing

Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

License

Distributed under the terms of the MIT license, "napari-math" is free and open source software

Issues

If you encounter any problems, please file an [issue] along with a detailed description.

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Comments

Fix layer1 choices

ugly but functional fix to layer1 choices.

also added a demo.py file that might be useful for rapid development.

I slightly modified the magic_factory params a bit, using the nullable option for layer1 (instead of the NO_LAYER sentinel), and used labels=False ... which necessitated the slightly hacky _lbl param in the function sig. your call if you prefer the other method of setting 'label': " " on all the other widgets

opened by tlambert03 0

Releases(v0.0.1b)

v0.0.1b(Mar 29, 2022)

Create individual widgets for each mathematical operation.

Full Changelog: https://github.com/zacsimile/napari-math/compare/v0.0.1a...v0.0.1b
Source code(tar.gz)
Source code(zip)
v0.0.1a(Jan 18, 2022)

Math operations on napari layers.
Source code(tar.gz)
Source code(zip)

Owner

Zach Marin

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