Debugging, monitoring and visualization for Python Machine Learning and Data Science

Overview

Welcome to TensorWatch

TensorWatch is a debugging and visualization tool designed for data science, deep learning and reinforcement learning from Microsoft Research. It works in Jupyter Notebook to show real-time visualizations of your machine learning training and perform several other key analysis tasks for your models and data.

TensorWatch is designed to be flexible and extensible so you can also build your own custom visualizations, UIs, and dashboards. Besides traditional "what-you-see-is-what-you-log" approach, it also has a unique capability to execute arbitrary queries against your live ML training process, return a stream as a result of the query and view this stream using your choice of a visualizer (we call this Lazy Logging Mode).

TensorWatch is under heavy development with a goal of providing a platform for debugging machine learning in one easy to use, extensible, and hackable package.

TensorWatch in Jupyter Notebook

How to Get It

pip install tensorwatch

TensorWatch supports Python 3.x and is tested with PyTorch 0.4-1.x. Most features should also work with TensorFlow eager tensors. TensorWatch uses graphviz to create network diagrams and depending on your platform sometime you might need to manually install it.

How to Use It

Quick Start

Here's simple code that logs an integer and its square as a tuple every second to TensorWatch:

import tensorwatch as tw
import time

# streams will be stored in test.log file
w = tw.Watcher(filename='test.log')

# create a stream for logging
s = w.create_stream(name='metric1')

# generate Jupyter Notebook to view real-time streams
w.make_notebook()

for i in range(1000):
    # write x,y pair we want to log
    s.write((i, i*i))

    time.sleep(1)

When you run this code, you will notice a Jupyter Notebook file test.ipynb gets created in your script folder. From a command prompt type jupyter notebook and select test.ipynb. Choose Cell > Run all in the menu to see the real-time line graph as values get written in your script.

Here's the output you will see in Jupyter Notebook:

TensorWatch in Jupyter Notebook

To dive deeper into the various other features, please see Tutorials and notebooks.

How does this work?

When you write to a TensorWatch stream, the values get serialized and sent to a TCP/IP socket as well as the file you specified. From Jupyter Notebook, we load the previously logged values from the file and then listen to that TCP/IP socket for any future values. The visualizer listens to the stream and renders the values as they arrive.

Ok, so that's a very simplified description. The TensorWatch architecture is actually much more powerful. Almost everything in TensorWatch is a stream. Files, sockets, consoles and even visualizers are streams themselves. A cool thing about TensorWatch streams is that they can listen to any other streams. This allows TensorWatch to create a data flow graph. This means that a visualizer can listen to many streams simultaneously, each of which could be a file, a socket or some other stream. You can recursively extend this to build arbitrary data flow graphs. TensorWatch decouples streams from how they get stored and how they get visualized.

Visualizations

In the above example, the line graph is used as the default visualization. However, TensorWatch supports many other diagram types including histograms, pie charts, scatter charts, bar charts and 3D versions of many of these plots. You can log your data, specify the chart type you want and let TensorWatch take care of the rest.

One of the significant strengths of TensorWatch is the ability to combine, compose, and create custom visualizations effortlessly. For example, you can choose to visualize an arbitrary number of streams in the same plot. Or you can visualize the same stream in many different plots simultaneously. Or you can place an arbitrary set of visualizations side-by-side. You can even create your own custom visualization widget simply by creating a new Python class, implementing a few methods.

Comparing Results of Multiple Runs

Each TensorWatch stream may contain a metric of your choice. By default, TensorWatch saves all streams in a single file, but you could also choose to save each stream in separate files or not to save them at all (for example, sending streams over sockets or into the console directly, zero hit to disk!). Later you can open these streams and direct them to one or more visualizations. This design allows you to quickly compare the results from your different experiments in your choice of visualizations easily.

Training within Jupyter Notebook

Often you might prefer to do data analysis, ML training, and testing - all from within Jupyter Notebook instead of from a separate script. TensorWatch can help you do sophisticated, real-time visualizations effortlessly from code that is run within a Jupyter Notebook end-to-end.

Lazy Logging Mode

A unique feature in TensorWatch is the ability to query the live running process, retrieve the result of this query as a stream and direct this stream to your preferred visualization(s). You don't need to log any data beforehand. We call this new way of debugging and visualization a lazy logging mode.

For example, as seen below, we visualize input and output image pairs, sampled randomly during the training of an autoencoder on a fruits dataset. These images were not logged beforehand in the script. Instead, the user sends query as a Python lambda expression which results in a stream of images that gets displayed in the Jupyter Notebook:

TensorWatch in Jupyter Notebook

See Lazy Logging Tutorial.

Pre-Training and Post-Training Tasks

TensorWatch leverages several excellent libraries including hiddenlayer, torchstat, Visual Attribution to allow performing the usual debugging and analysis activities in one consistent package and interface.

For example, you can view the model graph with tensor shapes with a one-liner:

Model graph for Alexnet

You can view statistics for different layers such as flops, number of parameters, etc:

Model statistics for Alexnet

See notebook.

You can view the dataset in a lower dimensional space using techniques such as t-SNE:

t-SNE visualization for MNIST

See notebook.

Prediction Explanations

We wish to provide various tools for explaining predictions to help debugging models. Currently, we offer several explainers for convolutional networks, including Lime. For example, the following highlights the areas that cause the Resnet50 model to make a prediction for class 240 for the Imagenet dataset:

CNN prediction explanation

See notebook.

Tutorials

Paper

More technical details are available in TensorWatch paper (EICS 2019 Conference). Please cite this as:

@inproceedings{tensorwatch2019eics,
  author    = {Shital Shah and Roland Fernandez and Steven M. Drucker},
  title     = {A system for real-time interactive analysis of deep learning training},
  booktitle = {Proceedings of the {ACM} {SIGCHI} Symposium on Engineering Interactive
               Computing Systems, {EICS} 2019, Valencia, Spain, June 18-21, 2019},
  pages     = {16:1--16:6},
  year      = {2019},
  crossref  = {DBLP:conf/eics/2019},
  url       = {https://arxiv.org/abs/2001.01215},
  doi       = {10.1145/3319499.3328231},
  timestamp = {Fri, 31 May 2019 08:40:31 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/eics/ShahFD19},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}

Contribute

We would love your contributions, feedback, questions, and feature requests! Please file a Github issue or send us a pull request. Please review the Microsoft Code of Conduct and learn more.

Contact

Join the TensorWatch group on Facebook to stay up to date or ask any questions.

Credits

TensorWatch utilizes several open source libraries for many of its features. These include: hiddenlayer, torchstat, Visual-Attribution, pyzmq, receptivefield, nbformat. Please see install_requires section in setup.py for upto date list.

License

This project is released under the MIT License. Please review the License file for more details.

Owner
Microsoft
Open source projects and samples from Microsoft
Microsoft
Python scripts to manage Chia plots and drive space, providing full reports. Also monitors the number of chia coins you have.

Chia Plot, Drive Manager & Coin Monitor (V0.5 - April 20th, 2021) Multi Server Chia Plot and Drive Management Solution Be sure to ⭐ my repo so you can

338 Nov 25, 2022
Easily convert matplotlib plots from Python into interactive Leaflet web maps.

mplleaflet mplleaflet is a Python library that converts a matplotlib plot into a webpage containing a pannable, zoomable Leaflet map. It can also embe

Jacob Wasserman 502 Dec 28, 2022
Interactive chemical viewer for 2D structures of small molecules

👀 mols2grid mols2grid is an interactive chemical viewer for 2D structures of small molecules, based on RDKit. ➡️ Try the demo notebook on Google Cola

Cédric Bouysset 154 Dec 26, 2022
Gaphas is the diagramming widget library for Python.

Gaphas Gaphas is the diagramming widget library for Python. Gaphas is a library that provides the user interface component (widget) for drawing diagra

Gaphor 144 Dec 14, 2022
Open-questions - Open questions for Bellingcat technical contributors

Open questions for Bellingcat technical contributors These are difficult, long-term projects that would contribute to open source investigations at Be

Bellingcat 234 Dec 31, 2022
PyPassword is a simple follow up to PyPassphrase

PyPassword PyPassword is a simple follow up to PyPassphrase. After finishing that project it occured to me that while some may wish to use that option

Scotty 2 Jan 22, 2022
Visualize tensors in a plain Python REPL using Sparklines

Visualize tensors in a plain Python REPL using Sparklines

Shawn Presser 43 Sep 03, 2022
Render Jupyter notebook in the terminal

jut - JUpyter notebook Terminal viewer. The command line tool view the IPython/Jupyter notebook in the terminal. Install pip install jut Usage $jut --

Kracekumar 169 Dec 27, 2022
The repository is my code for various types of data visualization cases based on the Matplotlib library.

ScienceGallery The repository is my code for various types of data visualization cases based on the Matplotlib library. It summarizes the code and cas

Warrick Xu 2 Apr 20, 2022
Generate a 3D Skyline in STL format and a OpenSCAD file from Gitlab contributions

Your Gitlab's contributions in a 3D Skyline gitlab-skyline is a Python command to generate a skyline figure from Gitlab contributions as Github did at

Félix Gómez 70 Dec 22, 2022
NumPy and Pandas interface to Big Data

Blaze translates a subset of modified NumPy and Pandas-like syntax to databases and other computing systems. Blaze allows Python users a familiar inte

Blaze 3.1k Jan 01, 2023
A high performance implementation of HDBSCAN clustering. http://hdbscan.readthedocs.io/en/latest/

HDBSCAN Now a part of scikit-learn-contrib HDBSCAN - Hierarchical Density-Based Spatial Clustering of Applications with Noise. Performs DBSCAN over va

Leland McInnes 91 Dec 29, 2022
Simple spectra visualization tool for astronomers

SpecViewer A simple visualization tool for astronomers. Dependencies Python = 3.7.4 PyQt5 = 5.15.4 pyqtgraph == 0.10.0 numpy = 1.19.4 How to use py

5 Oct 07, 2021
Drag’n’drop Pivot Tables and Charts for Jupyter/IPython Notebook, care of PivotTable.js

pivottablejs: the Python module Drag’n’drop Pivot Tables and Charts for Jupyter/IPython Notebook, care of PivotTable.js Installation pip install pivot

Nicolas Kruchten 512 Dec 26, 2022
A Jupyter - Leaflet.js bridge

ipyleaflet A Jupyter / Leaflet bridge enabling interactive maps in the Jupyter notebook. Usage Selecting a basemap for a leaflet map: Loading a geojso

Jupyter Widgets 1.3k Dec 27, 2022
This project is created to visualize the system statistics such as memory usage, CPU usage, memory accessible by process and much more using Kibana Dashboard with Elasticsearch.

System Stats Visualizer This project is created to visualize the system statistics such as memory usage, CPU usage, memory accessible by process and m

Vishal Teotia 5 Feb 06, 2022
CONTRIBUTIONS ONLY: Voluptuous, despite the name, is a Python data validation library.

CONTRIBUTIONS ONLY What does this mean? I do not have time to fix issues myself. The only way fixes or new features will be added is by people submitt

Alec Thomas 1.8k Dec 31, 2022
A script written in Python that generate output custom color (HEX or RGB input to x1b hexadecimal)

ColorShell ─ 1.5 Planned for v2: setup.sh for setup alias This script converts HEX and RGB code to x1b x1b is code for colorize outputs, works on ou

Riley 4 Oct 31, 2021
python partial dependence plot toolbox

PDPbox python partial dependence plot toolbox Motivation This repository is inspired by ICEbox. The goal is to visualize the impact of certain feature

Li Jiangchun 723 Jan 07, 2023
Visualize the training curve from the *.csv file (tensorboard format).

Training-Curve-Vis Visualize the training curve from the *.csv file (tensorboard format). Feature Custom labels Curve smoothing Support for multiple c

Luckky 7 Feb 23, 2022