36 Repositories
Latest Python Libraries
Readings for "A Unified View of Relational Deep Learning for Polypharmacy Side Effect, Combination Therapy, and Drug-Drug Interaction Prediction."
Polypharmacy - DDI - Synergy Survey The Survey Paper This repository accompanies our survey paper A Unified View of Relational Deep Learning for Polyp
Y. Zhang, Q. Yao, W. Dai, L. Chen. AutoSF: Searching Scoring Functions for Knowledge Graph Embedding. IEEE International Conference on Data Engineering (ICDE). 2020
AutoSF The code for our paper "AutoSF: Searching Scoring Functions for Knowledge Graph Embedding" and this paper has been accepted by ICDE2020. News:
The code for our paper "AutoSF: Searching Scoring Functions for Knowledge Graph Embedding"
AutoSF The code for our paper "AutoSF: Searching Scoring Functions for Knowledge Graph Embedding" and this paper has been accepted by ICDE2020. News:
ZSL-KG is a general-purpose zero-shot learning framework with a novel transformer graph convolutional network (TrGCN) to learn class representation from common sense knowledge graphs.
ZSL-KG is a general-purpose zero-shot learning framework with a novel transformer graph convolutional network (TrGCN) to learn class representa
Kglab - an abstraction layer in Python for building knowledge graphs
Graph Data Science: an abstraction layer in Python for building knowledge graphs, integrated with popular graph libraries – atop Pandas, RDFlib, pySHACL, RAPIDS, NetworkX, iGraph, PyVis, pslpython, p
Python implementation of TextRank for phrase extraction and summarization of text documents
PyTextRank PyTextRank is a Python implementation of TextRank as a spaCy pipeline extension, used to: extract the top-ranked phrases from text document
Code and Data for the paper: Molecular Contrastive Learning with Chemical Element Knowledge Graph [AAAI 2022]
Knowledge-enhanced Contrastive Learning (KCL) Molecular Contrastive Learning with Chemical Element Knowledge Graph [ AAAI 2022 ]. We construct a Chemi
Collective Multi-type Entity Alignment Between Knowledge Graphs (WWW'20)
CG-MuAlign A reference implementation for "Collective Multi-type Entity Alignment Between Knowledge Graphs", published in WWW 2020. If you find our pa
KE-Dialogue: Injecting knowledge graph into a fully end-to-end dialogue system.
Learning Knowledge Bases with Parameters for Task-Oriented Dialogue Systems This is the implementation of the paper: Learning Knowledge Bases with Par
novel deep learning research works with PaddlePaddle
Research 发布基于飞桨的前沿研究工作,包括CV、NLP、KG、STDM等领域的顶会论文和比赛冠军模型。 目录 计算机视觉(Computer Vision) 自然语言处理(Natrual Language Processing) 知识图谱(Knowledge Graph) 时空数据挖掘(Spa
novel deep learning research works with PaddlePaddle
Research 发布基于飞桨的前沿研究工作,包括CV、NLP、KG、STDM等领域的顶会论文和比赛冠军模型。 目录 计算机视觉(Computer Vision) 自然语言处理(Natrual Language Processing) 知识图谱(Knowledge Graph) 时空数据挖掘(Spa
Espial is an engine for automated organization and discovery of personal knowledge
Live Demo (currently not running, on it) Espial is an engine for automated organization and discovery in knowledge bases. It can be adapted to run wit
Readings for "A Unified View of Relational Deep Learning for Polypharmacy Side Effect, Combination Therapy, and Drug-Drug Interaction Prediction."
Polypharmacy - DDI - Synergy Survey The Survey Paper This repository accompanies our survey paper A Unified View of Relational Deep Learning for Polyp
This folder contains the implementation of the multi-relational attribute propagation algorithm.
MrAP This folder contains the implementation of the multi-relational attribute propagation algorithm. It requires the package pytorch-scatter. Please
Code for the SIGIR 2022 paper "Hybrid Transformer with Multi-level Fusion for Multimodal Knowledge Graph Completion"
MKGFormer Code for the SIGIR 2022 paper "Hybrid Transformer with Multi-level Fusion for Multimodal Knowledge Graph Completion" Model Architecture Illu
In-memory Graph Database and Knowledge Graph with Natural Language Interface, compatible with Pandas
CogniPy for Pandas - In-memory Graph Database and Knowledge Graph with Natural Language Interface Whats in the box Reasoning, exploration of RDF/OWL,
Extracting knowledge graphs from language models as a diagnostic benchmark of model performance.
Interpreting Language Models Through Knowledge Graph Extraction Idea: How do we interpret what a language model learns at various stages of training?
Learning Intents behind Interactions with Knowledge Graph for Recommendation, WWW2021
Learning Intents behind Interactions with Knowledge Graph for Recommendation This is our PyTorch implementation for the paper: Xiang Wang, Tinglin Hua
Federated learning on graph, especially on graph neural networks (GNNs), knowledge graph, and private GNN.
Federated learning on graph, especially on graph neural networks (GNNs), knowledge graph, and private GNN.
Code for paper "A Critical Assessment of State-of-the-Art in Entity Alignment" (https://arxiv.org/abs/2010.16314)
A Critical Assessment of State-of-the-Art in Entity Alignment This repository contains the source code for the paper A Critical Assessment of State-of
QA-GNN: Question Answering using Language Models and Knowledge Graphs
QA-GNN: Question Answering using Language Models and Knowledge Graphs This repo provides the source code & data of our paper: QA-GNN: Reasoning with L
Conflict-aware Inference of Python Compatible Runtime Environments with Domain Knowledge Graph, ICSE 2022
PyCRE Conflict-aware Inference of Python Compatible Runtime Environments with Domain Knowledge Graph, ICSE 2022 Dependencies This project is developed
Precision Medicine Knowledge Graph (PrimeKG)
PrimeKG Website | bioRxiv Paper | Harvard Dataverse Precision Medicine Knowledge Graph (PrimeKG) presents a holistic view of diseases. PrimeKG integra
Rubrix is a free and open-source tool for exploring and iterating on data for artificial intelligence projects.
Open-source tool for exploring, labeling, and monitoring data for AI projects
✨Rubrix is a production-ready Python framework for exploring, annotating, and managing data in NLP projects.
✨A Python framework to explore, label, and monitor data for NLP projects
Meandering In Networks of Entities to Reach Verisimilar Answers
MINERVA Meandering In Networks of Entities to Reach Verisimilar Answers Code and models for the paper Go for a Walk and Arrive at the Answer - Reasoni
Elliot is a comprehensive recommendation framework that analyzes the recommendation problem from the researcher's perspective.
Comprehensive and Rigorous Framework for Reproducible Recommender Systems Evaluation
This repo provides the source code & data of our paper "GreaseLM: Graph REASoning Enhanced Language Models"
GreaseLM: Graph REASoning Enhanced Language Models This repo provides the source code & data of our paper "GreaseLM: Graph REASoning Enhanced Language
TigerLily: Finding drug interactions in silico with the Graph.
Drug Interaction Prediction with Tigerlily Documentation | Example Notebook | Youtube Video | Project Report Tigerlily is a TigerGraph based system de
CSKG is a commonsense knowledge graph that combines seven popular sources into a consolidated representation
CSKG: The CommonSense Knowledge Graph CSKG is a commonsense knowledge graph that combines seven popular sources into a consolidated representation: AT
A PoC Corporation Relationship Knowledge Graph System on top of Nebula Graph.
Corp-Rel is a PoC of Corpartion Relationship Knowledge Graph System. It's built on top of the Open Source Graph Database: Nebula Graph with a dataset
This is the repo for the paper `SumGNN: Multi-typed Drug Interaction Prediction via Efficient Knowledge Graph Summarization'. (published in Bioinformatics'21)
SumGNN: Multi-typed Drug Interaction Prediction via Efficient Knowledge Graph Summarization This is the code for our paper ``SumGNN: Multi-typed Drug
NLP and Text Generation Experiments in TensorFlow 2.x / 1.x
Code has been run on Google Colab, thanks Google for providing computational resources Contents Natural Language Processing(自然语言处理) Text Classificati
A Deep Learning Based Knowledge Extraction Toolkit for Knowledge Base Population
DeepKE is a knowledge extraction toolkit supporting low-resource and document-level scenarios for entity, relation and attribute extraction. We provide comprehensive documents, Google Colab tutorials
OntoProtein: Protein Pretraining With Ontology Embedding
OntoProtein This is the implement of the paper "OntoProtein: Protein Pretraining With Ontology Embedding". OntoProtein is an effective method that mak
Large-scale Knowledge Graph Construction with Prompting
Large-scale Knowledge Graph Construction with Prompting across tasks (predictive and generative), and modalities (language, image, vision + language, etc.)