Some useful extensions for Matplotlib.

Overview

mplx

Some useful extensions for Matplotlib.

PyPi Version PyPI pyversions GitHub stars Downloads

gh-actions codecov LGTM Code style: black

Contour plots for functions with discontinuities

plt.contour mplx.contour(max_jump=1.0)

Matplotlib has problems with contour plots of functions that have discontinuities. The software has no way to tell discontinuities and very sharp, but continuous cliffs apart, and contour lines will be drawn along the discontinuity.

mplx improves upon this by adding the parameter max_jump. If the difference between two function values in the grid is larger than max_jump, a discontinuity is assumed and no line is drawn. Similarly, min_jump can be used to highlight the discontinuity.

As an example, take the function imag(log(Z)) for complex values Z. Matplotlib's contour lines along the negative real axis are wrong.

import matplotlib.pyplot as plt
import numpy as np

import mplx

x = np.linspace(-2.0, 2.0, 100)
y = np.linspace(-2.0, 2.0, 100)

X, Y = np.meshgrid(x, y)
Z = X + 1j * Y

vals = np.imag(np.log(Z))

# plt.contour(X, Y, vals, levels=[-2.0, -1.0, 0.0, 1.0, 2.0])  # draws wrong lines
mplx.contour(X, Y, vals, levels=[-2.0, -1.0, 0.0, 1.0, 2.0], max_jump=1.0)
mplx.contour(X, Y, vals, levels=[0.0], min_jump=1.0, linestyles=":")

plt.gca().set_aspect("equal")
plt.show()

Relevant discussions:

License

This software is published under the MIT license.

Comments
  • Remove some typing hint to support older numpy ?

    Remove some typing hint to support older numpy ?

    Hello, I got an error ModuleNotFoundError: No module named 'numpy.typing' due to the typing hint from numpy.typing import ArrayLike.

    Would you mind remove this hint to support older numpy version like 1.19.* ? It seems no performance issue after remove it.

    opened by ProV1denCEX 5
  • Support for horizontal barchart

    Support for horizontal barchart

    This PR solves #30 by adding an alignment argument to show_bar_values defaulting to "vertical".

    I couldn't think of a robust way of determining the alignment automatically. Checking if the width of the bar is greater or lower than its height seemed a bit dodgy in some cases... I don't know. What do you think @nschloe ?

    Usage (adapted from README demo):

    import matplotlib.pyplot as plt
    import matplotx
    
    labels = ["Australia", "Brazil", "China", "Germany", "Mexico", "United\nStates"]
    vals = [21.65, 24.5, 6.95, 8.40, 21.00, 8.55]
    ypos = range(len(vals))
    
    
    with plt.style.context(matplotx.styles.dufte_bar):
        plt.barh(ypos, vals)
        plt.yticks(ypos, labels)
        matplotx.show_bar_values("{:.2f}", alignment="horizontal")
        plt.title("average temperature [°C]")
        plt.tight_layout()
        plt.show()
    

    Produces: Figure_1

    opened by RemDelaporteMathurin 3
  • Support for horizontal barchart

    Support for horizontal barchart

    matplotx.show_bar_values works perfectly with vertical bar charts but not with horizontal bar charts.

    These are often used with long text labels.

    import matplotlib.pyplot as plt
    import matplotx
    
    labels = ["Australia", "Brazil", "China", "Germany", "Mexico", "United\nStates"]
    vals = [21.65, 24.5, 6.95, 8.40, 21.00, 8.55]
    ypos = range(len(vals))
    
    with plt.style.context(matplotx.styles.dufte_bar):
        plt.barh(ypos, vals)
        plt.yticks(ypos, labels)
        matplotx.show_bar_values("{:.2f}")
        plt.title("average temperature [°C]")
        plt.tight_layout()
        plt.show()
    
    

    Produces: image

    I can write a PR and add a show_hbar_values() function that works with horizontal bar charts and produces: image

    Or it can also be an argument of matplotx.show_bar_value defaulting to "vertical" like show_bar_value(alignement="horizontal")

    What do you think @nschloe ?

    opened by RemDelaporteMathurin 2
  • Citation

    Citation

    Great package! Thank you so much it really helps!

    I will surely use this in my next paper/talk. How can I cite this package?

    Do you plan on adding a Zenodo DOI?

    Cheers Remi

    opened by RemDelaporteMathurin 2
  • Some styles are broken

    Some styles are broken

    Using the code example in the readme:

    import matplotlib.pyplot as plt
    import matplotx
    plt.style.use(matplotx.styles.ayu)
    

    I get this error:

    File ~/.conda/envs/.../lib/python3.10/site-packages/matplotlib/style/core.py:117, in use(style)
        115 for style in styles:
        116     if not isinstance(style, (str, Path)):
    --> 117         _apply_style(style)
        118     elif style == 'default':
        119         # Deprecation warnings were already handled when creating
        120         # rcParamsDefault, no need to reemit them here.
        121         with _api.suppress_matplotlib_deprecation_warning():
    
    File ~/.conda/envs/.../lib/python3.10/site-packages/matplotlib/style/core.py:62, in _apply_style(d, warn)
         61 def _apply_style(d, warn=True):
    ---> 62     mpl.rcParams.update(_remove_blacklisted_style_params(d, warn=warn))
    
    File ~/.conda/envs/.../lib/python3.10/_collections_abc.py:994, in MutableMapping.update(self, other, **kwds)
        992 if isinstance(other, Mapping):
        993     for key in other:
    --> 994         self[key] = other[key]
        995 elif hasattr(other, "keys"):
        996     for key in other.keys():
    
    File ~/.conda/envs/.../lib/python3.10/site-packages/matplotlib/__init__.py:649, in RcParams.__setitem__(self, key, val)
        647     dict.__setitem__(self, key, cval)
        648 except KeyError as err:
    --> 649     raise KeyError(
        650         f"{key} is not a valid rc parameter (see rcParams.keys() for "
        651         f"a list of valid parameters)") from err
    
    KeyError: 'dark is not a valid rc parameter (see rcParams.keys() for a list of valid parameters)'
    

    Lib versions:

    matplotlib-base           3.5.2           py310h5701ce4_1    conda-forge
    matplotx                  0.3.7                    pypi_0    pypi
    

    This happens with aura, ayu, github, gruvbox and others.

    Some of the themes working are: challenger_deep, dracula, dufte, nord, tab10

    opened by floringogianu 1
  • Support for subplots

    Support for subplots

    Related to the issue I opened. It seems that small changes already go quite a long way towards support for subplots. This does not yet work for the style.

    For the original code, everything was correctly calculated with the axes in mind, but then it was applied to plt instead of ax, even if an ax parameter was supplied for line_labels, it was still applied to plt.

    The code changes should have no effect when there are no subplots. When there are subplots, the code now offers better support.

    import matplotlib.pyplot as plt
    import matplotx
    import numpy as np
    
    # create data
    rng = np.random.default_rng(0)
    offsets = [1.0, 1.50, 1.60]
    labels = ["no balancing", "CRV-27", "CRV-27*"]
    names = ["Plot left", "Plot right"]
    x0 = np.linspace(0.0, 3.0, 100)
    y = [offset * x0 / (x0 + 1) + 0.1 * rng.random(len(x0)) for offset in offsets]
    
    fig, axes = plt.subplots(2,1)                                           
    
    for ax, name in zip(axes, names):                                                         
        with plt.style.context(matplotx.styles.dufte):
            for yy, label in zip(y, labels):
                ax.plot(x0, yy, label=label)                                
            ax.set_xlabel("distance [m]")                                   
        matplotx.ylabel_top(name)    
        matplotx.line_labels(ax=ax)
    

    Original code

    image

    New code

    image

    opened by mitchellvanzuijlen 1
  • dufte.legend allow plt.text kwargs

    dufte.legend allow plt.text kwargs

    To draw the legend dufte uses plt.text() https://github.com/nschloe/dufte/blob/main/src/dufte/main.py#L196

    plt.text() allows for additional kwargs to customize the text https://matplotlib.org/stable/api/_as_gen/matplotlib.pyplot.text.html

    If possible, could you loop through the additional text kwargs to allow for a higher customizable legend?

    opened by exc4l 0
  • Improper ylabel_top placement

    Improper ylabel_top placement

    I've been using matplotx.ylabel_top and just noticed an issue with the label placement after setting the y tick labels explicitly. A working example is below.

    import numpy as np
    from seaborn import scatterplot
    import matplotx
    
    rng = np.random.default_rng(42)
    x = rng.random(100)
    y = -2*x + rng.normal(0, 0.5, 100)
    ax = scatterplot(
        x=x,
        y=y
    )
    ax.set_yticks([0, -1, -2])
    matplotx.ylabel_top('Example\nLabel')
    

    example

    i'm using

    numpy==1.23.4
    seaborn==0.12.1
    matplotx==0.3.10
    
    opened by markmbaum 0
  • First example images not properly clickable in readme

    First example images not properly clickable in readme

    I just came across this project, looks really neat. Especially the smooth contourf got me curious.

    I've noticed in the readme that (at least on firefox) if I click any of the three images, the link that opens (even with the "open image in new tab" context menu option) is https://github.com/nschloe/matplotx/blob/main/tests/dufte_comparison.py. In contrast, the contourf images open just fine, for instance.

    I assume the reason for this is the enclosing a tag for the first example: https://github.com/nschloe/matplotx/blob/c767b08ea91492b1db9626b8b2c8786b4bc99458/README.md?plain=1#L39

    In case this is not just a firefox thing, I would recommend trying to make the first three images clickable on their own right.

    opened by adeak 0
  • Adapt `line_labels` for `PolyCollections`

    Adapt `line_labels` for `PolyCollections`

    I'm keen on making a PR to adapt line_labels to make it work with fill_between objects (PolyCollection)

    This would be the usage and output:

    import matplotlib.pyplot as plt
    import matplotx
    import numpy as np
    
    x = np.linspace(0, 1)
    y1 = np.linspace(1, 2)
    y2 = np.linspace(2, 4)
    
    plt.fill_between(x, y1, label="label1")
    plt.fill_between(x, y1, y2, label="label1")
    
    matplotx.label_fillbetween()
    plt.show()
    

    image

    @nschloe would you be interested in this feature?

    opened by RemDelaporteMathurin 0
  • Support for subplots

    Support for subplots

    Perhaps this is already implemented and I'm just unable to find it. I think this package in general is great; very easy to use and very beautiful. Thank you for your time making it.

    I'm unable to get matplotx working properly when using subplots. Adapting the Clean line plots (dufte) example to include two subplots (side-by-side, or one-below-the-other) appears not to work.

    import matplotlib.pyplot as plt
    import matplotx
    import numpy as np
    
    # create data
    rng = np.random.default_rng(0)
    offsets = [1.0, 1.50, 1.60]
    labels = ["no balancing", "CRV-27", "CRV-27*"]
    x0 = np.linspace(0.0, 3.0, 100)
    y = [offset * x0 / (x0 + 1) + 0.1 * rng.random(len(x0)) for offset in offsets]
    
    fig, axes = plt.subplots(2,1)                                           # add subplots
    
    for ax in axes:                                                         # Let's make two identical subplots
        with plt.style.context(matplotx.styles.dufte):
            for yy, label in zip(y, labels):
                ax.plot(x0, yy, label=label)                                # changed plt. to ax.
            ax.set_xlabel("distance [m]")                                   # changed plt. to ax.
            matplotx.ylabel_top("voltage [V]")                              # move ylabel to the top, rotate
            matplotx.line_labels()                                          # line labels to the right
            #plt.show()                                                     # Including this adds the 'pretty axis' below the subplots.                             
    

    image

    opened by mitchellvanzuijlen 2
Releases(v0.3.10)
Owner
Nico Schlömer
Mathematics, numerical analysis, scientific computing, Python. Always interested in new problems.
Nico Schlömer
LinkedIn connections analyzer

LinkedIn Connections Analyzer 🔗 https://linkedin-analzyer.herokuapp.com Hey hey 👋 , welcome to my LinkedIn connections analyzer. I recently found ou

Okkar Min 5 Sep 13, 2022
Active Transport Analytics Model (ATAM) is a new strategic transport modelling and data visualization framework for Active Transport as well as emerging micro-mobility modes

{ATAM} Active Transport Analytics Model Active Transport Analytics Model (“ATAM”) is a new strategic transport modelling and data visualization framew

Peter Stephan 0 Jan 12, 2022
Generating interfaces(CLI, Qt GUI, Dash web app) from a Python function.

oneFace is a Python library for automatically generating multiple interfaces(CLI, GUI, WebGUI) from a callable Python object. oneFace is an easy way t

NaNg 31 Oct 21, 2022
Create animated and pretty Pandas Dataframe or Pandas Series

Rich DataFrame Create animated and pretty Pandas Dataframe or Pandas Series, as shown below: Installation pip install rich-dataframe Usage Minimal exa

Khuyen Tran 92 Dec 26, 2022
Debugging, monitoring and visualization for Python Machine Learning and Data Science

Welcome to TensorWatch TensorWatch is a debugging and visualization tool designed for data science, deep learning and reinforcement learning from Micr

Microsoft 3.3k Dec 27, 2022
Create charts with Python in a very similar way to creating charts using Chart.js

Create charts with Python in a very similar way to creating charts using Chart.js. The charts created are fully configurable, interactive and modular and are displayed directly in the output of the t

Nicolas H 68 Dec 08, 2022
Frbmclust - Clusterize FRB profiles using hierarchical clustering, plot corresponding parameters distributions

frbmclust Getting Started Clusterize FRB profiles using hierarchical clustering,

3 May 06, 2022
A Python-based non-fungible token (NFT) generator built using Samilla and Matplotlib

PyNFT A Pythonic NF (non-fungible token) generator built using Samilla and Matplotlib Use python pynft.py [amount] The intention behind this generato

Ayush Gundawar 6 Feb 07, 2022
Rick and Morty Data Visualization with python

Rick and Morty Data Visualization For this project I looked at data for the TV show Rick and Morty Number of Episodes at a Certain Location Here is th

7 Aug 29, 2022
Statistical data visualization using matplotlib

seaborn: statistical data visualization Seaborn is a Python visualization library based on matplotlib. It provides a high-level interface for drawing

Michael Waskom 10.2k Dec 30, 2022
Productivity Tools for Plotly + Pandas

Cufflinks This library binds the power of plotly with the flexibility of pandas for easy plotting. This library is available on https://github.com/san

Jorge Santos 2.7k Dec 30, 2022
A site that displays up to date COVID-19 stats, powered by fastpages.

https://covid19dashboards.com This project was built with fastpages Background This project showcases how you can use fastpages to create a static das

GitHub 1.6k Jan 07, 2023
Collection of scripts for making high quality beautiful math-related posters.

Poster Collection of scripts for making high quality beautiful math-related posters. The poster can have as large printing size as 3x2 square feet wit

Nattawut Phetmak 3 Jun 09, 2022
A tool for creating SVG timelines from simple JSON input.

A tool for creating SVG timelines from simple JSON input.

Jason Reisman 432 Dec 30, 2022
A minimalistic wrapper around PyOpenGL to save development time

glpy glpy is pyOpenGl wrapper which lets you work with pyOpenGl easily.It is not meant to be a replacement for pyOpenGl but runs on top of pyOpenGl to

Abhinav 9 Apr 02, 2022
An XLSX spreadsheet renderer for Django REST Framework.

drf-renderer-xlsx provides an XLSX renderer for Django REST Framework. It uses OpenPyXL to create the spreadsheet and returns the data.

The Wharton School 166 Dec 01, 2022
Simple python implementation with matplotlib to manually fit MIST isochrones to Gaia DR2 color-magnitude diagrams

Simple python implementation with matplotlib to manually fit MIST isochrones to Gaia DR2 color-magnitude diagrams

Karl Jaehnig 7 Oct 22, 2022
Simple and fast histogramming in Python accelerated with OpenMP.

pygram11 Simple and fast histogramming in Python accelerated with OpenMP with help from pybind11. pygram11 provides functions for very fast histogram

Doug Davis 28 Dec 14, 2022
Python package to Create, Read, Write, Edit, and Visualize GSFLOW models

pygsflow pyGSFLOW is a python package to Create, Read, Write, Edit, and Visualize GSFLOW models API Documentation pyGSFLOW API documentation can be fo

pyGSFLOW 21 Dec 14, 2022
Moscow DEG 2021 elections plots

Построение графиков на основе публичных данных о ДЭГ в Москве в 2021г. Описание Скрипты в данном репозитории позволяют собственноручно построить графи

9 Jul 15, 2022