Data preprocessing rosetta parser for python

Overview

datapreprocessing_rosetta_parser

I've never done any NLP or text data processing before, so I wanted to use this hackathon as a learning opportunity, specifically targeting popular packages like pandas, beautifulsoup and spacy.

The main idea of my project is to recreate Jelle Teijema's preprocessing pipeline and then try to run Dutch language model on each document to extract things of interest, such as emails, urls, organizations, people and dates. Maybe at this point, it shouldn't be considered just pre-processing, hmmm. Anyway, I've used nl_core_news_lg model. It is not very reliable, especially for organization and person names, however, it still allows for interesting queries.

Moreover, I've decided to try to do a summarization and collection of the most frequent words in the documents. My script tries to find N_SUMMARY_SENTENCES most important sentences and store it in the summary column. Please note, my Dutch is not very strong, so I can't really judge how well it works :)

Finally, the script also saves cleaned title and file contents, as per track anticipated output.

Output file

generate.py reads .csv files from input_data folder and produces output .csv file with | separator. It is pretty heavy (about x1.8 of input csv, ~75MB) and has a total of 15 columns:

Column name Description
filename Original filename provided in the input file
file_content Original file contents provided in the input file
id The dot separated numbers from the filename
category Type of a file
filename_date Date extracted from a filename
parsed_date Date extracted from file contents
found_emails Emails found in the file contents
found_urls URLs found in the file contents
found_organizations Organizations found in the file contents
found_people People found in the file contents
found_dates Dates found in the file contents
summary Summary of the document
top5words Top 5 most frequently used words in the file contents
title Somewhat cleaned title
abstract Somewhat cleaned file contents

Some interesting queries that I could think of at 12pm

  1. Load the output processed .csv file:
import pandas as pd
df = pd.read_csv('./output_data/processed_data.csv', sep='|',
                 index_col=0, dtype=str)
  1. All unique emails found in the documents:
import ast
emails = sum([ast.literal_eval(x) for x in df['found_emails']], [])
unique_emails = set(emails)
  1. Top 10 communicated domains in the documents:
from collections import Counter
domains = [x.split('@')[1] for x in emails]
d_counter = Counter(domains)
print(d_counter.most_common(10))
  1. Top 10 organizations mentioned in the documents:
orgs = sum([ast.literal_eval(x) for x in df['found_organizations']], [])
o_counter = Counter(orgs)
print(o_counter.most_common(10))
  1. Find IDs of documents that contain word "confidential" in them:
df['id'][df['abstract'].str.contains('confidential')]
  1. How many documents and categories there are in the dataset:
print(f'Total number of documents: {len(df)}')
print('Documents by category:')
df['category'].value_counts()

and I am sure you can be significantly more creative with this :)

How to generate output data

  1. Install dependencies with conda and switch to the environment:
conda env create -f environment.yml
conda activate ftm_hackathon

Alternatively (not tested), you can install packages to your current environment manually:

pip install spacy tqdm pandas bs4
  1. Download Dutch spacy model, ~500MB:
python -m spacy download nl_core_news_lg
  1. Put your raw .csv files into input_data folder.

  2. Run generate.py. On my 6yo laptop it takes ~17 minutes.

  3. The result will be written in output_data/processed_data.csv

Owner
ASReview hackathon for Follow the Money
ASReview hackathon for Follow the Money
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