Genomics Workshop
FIXME: overview of workshop
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FIXME: overview of workshop
All participants should agree to abide by The Carpentries Code of Conduct.
FIXME
Please cite as:
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tedana: TE Dependent ANAlysis TE-dependent analysis (tedana) is a Python library for denoising multi-echo functional magnetic resonance imaging (fMRI)
wcc_analysis Lichess page documentation: https://lichess.org/page/world-championships Each WCC has a study, studies are fetched using: https://lichess
MetaFrame A data structure that extends pyspark.sql.DataFrame with metadata info
Scanpy – Single-Cell Analysis in Python Scanpy is a scalable toolkit for analyzing single-cell gene expression data built jointly with anndata. It inc
PATC: Introduction to Big Data Analytics. Practical Data Analytics for Solving Real World Problems
A set of Python codes for the generation of biomedical ontologies from the MeSH keywords of the PubMed scholarly publications
We work with the accounting department of a company that sells motorcycle parts. The company operates three warehouses in a large metropolitan area.
Analysis of a dataset of 10000 passwords to find common trends and mistakes people generally make while setting up a password.
Statistical Rethinking: A Bayesian Course Using CmdStanPy and Plotnine Intro This repo contains the python/stan version of the Statistical Rethinking
A multi-platform GUI for bit-based analysis, processing, and visualization
PyFunctional Features PyFunctional makes creating data pipelines easy by using chained functional operators. Here are a few examples of what it can do
Remora Methylation/modified base calling separated from basecalling. Remora primarily provides an API to call modified bases for basecaller programs s
Edward is a Python library for probabilistic modeling, inference, and criticism. It is a testbed for fast experimentation and research with probabilis
PyStan PyStan is a Python interface to Stan, a package for Bayesian inference. Stan® is a state-of-the-art platform for statistical modeling and high-
databooks is a package for reducing the friction data scientists while using Jupyter notebooks, by reducing the number of git conflicts between different notebooks and assisting in the resolution of
follow-analyzer follow-analyzer helps GitHub users analyze their following and followers relationship by providing a report in html format which conta
HydDown Hydrogen (or other pure gas phase species) depressurization calculations This code is published under an MIT license. Install as simple as: pi
Visions And these visions of data types, they kept us up past the dawn. Visions provides an extensible suite of tools to support common data analysis
This project is the implementation template for HW 0 and HW 1 for both the programming and non-programming tracks
First steps with Python in Life Sciences This course material is part of the "First Steps with Python in Life Science" three-day course of SIB-trainin