NFCDS Workshop Beginners Guide Bioinformatics Data Analysis

Overview

DOI

Genomics Workshop

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Code of Conduct

All participants should agree to abide by The Carpentries Code of Conduct.

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Owner
Elizabeth Brooks
Check out my website: https://morphoscape.wordpress.com/
Elizabeth Brooks
TE-dependent analysis (tedana) is a Python library for denoising multi-echo functional magnetic resonance imaging (fMRI) data

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Analysiscsv.py for extracting analysis and exporting as CSV

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A data structure that extends pyspark.sql.DataFrame with metadata information.

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Single-Cell Analysis in Python. Scales to >1M cells.

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PATC: Introduction to Big Data Analytics. Practical Data Analytics for Solving Real World Problems

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MeSH2Matrix - A set of Python codes for the generation of biomedical ontologies from the MeSH keywords of the PubMed scholarly publications

A set of Python codes for the generation of biomedical ontologies from the MeSH keywords of the PubMed scholarly publications

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MotorcycleParts DataAnalysis python

We work with the accounting department of a company that sells motorcycle parts. The company operates three warehouses in a large metropolitan area.

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Analysis of a dataset of 10000 passwords to find common trends and mistakes people generally make while setting up a password.

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Statistical Rethinking: A Bayesian Course Using CmdStanPy and Plotnine

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Methylation/modified base calling separated from basecalling.

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PyStan, a Python interface to Stan, a platform for statistical modeling. Documentation: https://pystan.readthedocs.io

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A CLI tool to reduce the friction between data scientists by reducing git conflicts removing notebook metadata and gracefully resolving git conflicts.

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follow-analyzer helps GitHub users analyze their following and followers relationship

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Hydrogen (or other pure gas phase species) depressurization calculations

HydDown Hydrogen (or other pure gas phase species) depressurization calculations This code is published under an MIT license. Install as simple as: pi

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Visions provides an extensible suite of tools to support common data analysis operations

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This project is the implementation template for HW 0 and HW 1 for both the programming and non-programming tracks

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