A Scheil-Gulliver simulation tool using pycalphad.

Overview

scheil

A Scheil-Gulliver simulation tool using pycalphad.

import matplotlib.pyplot as plt
from pycalphad import Database, variables as v
from scheil import simulate_scheil_solidification

# setup the simulation parameters
dbf = Database('alzn_mey.tdb')
comps = ['AL', 'ZN', 'VA']
phases = sorted(dbf.phases.keys())

liquid_phase_name = 'LIQUID'
initial_composition = {v.X('ZN'): 0.3}
start_temperature = 850

# perform the simulation
sol_res = simulate_scheil_solidification(dbf, comps, phases, initial_composition, start_temperature, step_temperature=1.0)

# plot the result
for phase_name, amounts in sol_res.cum_phase_amounts.items():
    plt.plot(sol_res.temperatures, amounts, label=phase_name)
plt.plot(sol_res.temperatures, sol_res.fraction_liquid, label='LIQUID')
plt.ylabel('Phase Fraction')
plt.xlabel('Temperature (K)')
plt.title('Al-30Zn Scheil simulation, phase fractions')
plt.legend(loc='best')
plt.show()

Phase fraction evolution during a Scheil simulation of Al-30Zn

Installation

pip (recommended)

scheil is suggested to be installed from PyPI.

pip install scheil

Anaconda

conda install -c conda-forge scheil

Development versions

To install an editable development version with pip:

git clone https://github.com/pycalphad/scheil.git
cd scheil
pip install --editable .[dev]

Upgrading scheil later requires you to run git pull in this directory.

Run the automated tests using

pytest

Theory

Uses classic Scheil-Gulliver theory (see G.H. Gulliver, J. Inst. Met. 9 (1913) 120–157 and Scheil, Zeitschrift Für Met. 34 (1942) 70–72.) with assumptions of

  1. Perfect mixing in the liquid
  2. Local equilibrium between solid and liquid
  3. No diffusion in the solid

Getting Help

For help on installing and using scheil, please join the pycalphad/pycalphad Gitter room.

Bugs and software issues should be reported on GitHub.

License

scheil is MIT licensed. See LICENSE.

Citing

If you use the scheil package in your work, please cite the relevant version.

The following DOI, doi:10.5281/zenodo.3630656, will link to the latest released version of the code on Zenodo where you can cite the specific version that you haved used. For example, version 0.1.2 can be cited as:

Bocklund, Brandon, Bobbio, Lourdes D., Otis, Richard A., Beese, Allison M., & Liu, Zi-Kui. (2020, January 29). pycalphad-scheil: 0.1.2 (Version 0.1.2). Zenodo. http://doi.org/10.5281/zenodo.3630657
@software{bocklund_brandon_2020_3630657,
  author       = {Bocklund, Brandon and
                  Bobbio, Lourdes D. and
                  Otis, Richard A. and
                  Beese, Allison M. and
                  Liu, Zi-Kui},
  title        = {pycalphad-scheil: 0.1.2},
  month        = jan,
  year         = 2020,
  publisher    = {Zenodo},
  version      = {0.1.2},
  doi          = {10.5281/zenodo.3630657},
  url          = {https://doi.org/10.5281/zenodo.3630657}
}
Comments
  • Multicomponent systems stop prematurely

    Multicomponent systems stop prematurely

    Hi Brandon, I am trying to use pycalphad to simulate solidification behaviour of alloys 625 and Monel. I noticed that simulation ends at some temperature dependent on composition and temperature step, even if solidification is far from complete. I attach an extreme example for Monel, comparing temperature steps of 5K and 2K. The simulation with 2K stops prematurely. I noted a similar behavior with alloys 625, even if not so dramatic. Also changes in composition affects the end point.

    image image

    I attach the code and the database I am using, derived from mc_ni_v2.034.tdb Thank you very much for your help and all you did with pycalphad!

    MonelScheil.txt ARNi.txt

    opened by AndRicci 10
  • Error while simulating Ni-Al-Cr system

    Error while simulating Ni-Al-Cr system

    I am using a revised version of Ni-database from MatCalc. This database works with pycalphad 0.8.3. When I run scheil 0.1.1, I got error message: ALN: Sublattice frozenset({Species('N', 'N1')}) of (frozenset({Species('AL', 'AL1')}), frozenset({Species('N', 'N1')})) has no components in {Species('AL', 'AL1')}

    Any suggestion?

    opened by dpttw 2
  • `simulate_equilibrium_solidification` should do order/disorder checks automatically

    `simulate_equilibrium_solidification` should do order/disorder checks automatically

    Currently there are no checks for order/disorder phase name checking in simulate_equilibrium_solidification, so a order/disorder modeled phase that is in a disordered configuration will still show as the ordered phase name.

    The main challenge in making this change that the order/disorder check assumes a pycalphad LightDataset, rather than xarray Dataset.

    opened by bocklund 1
  • Performance pass

    Performance pass

    The code should be profiled and any optimizations made if possible and reasonable.

    For example, equilibrium(..., to_xarray=False) could be used, but the indexing into the LightDataset objects would have to be updated

    opened by bocklund 1
  • Multicomponent systems incorrectly terminate at peritectic reactions

    Multicomponent systems incorrectly terminate at peritectic reactions

    Peritectic-type reactions in the ternary go from L+A -> A+B, terminating the current Scheil algorithm. Section 12.8 in Hillert's Phase Equilibria, Phase Diagrams, and Phase Transformations (2nd Edition) may be insightful. Specifically, the idea below might be able to be used to determine when a peritectic region is found and how to update the composition of the liquid so that the liquidus can continue to be followed down the liquidus projection to a eutectic.

    screen shot 2019-01-02 at 2 02 47 pm
    opened by bocklund 1
  • ENH: improve handling for ordered phases

    ENH: improve handling for ordered phases

    Introduces an OrderingRecord object to track the relationship between ordered and disordered phases, replacing the old ordering code. The new ordering approach can be used for arbitrary equilibrium calculations and is used to fix #8.

    The logic for defining how to compare the disordered phases is currently the same as before, considering the site ratios to determine equivalent sublattices. I am deferring action on this with the issue filed in https://github.com/pycalphad/scheil/issues/23.

    opened by bocklund 0
  • ENH: use adaptive sampling by default

    ENH: use adaptive sampling by default

    • Points dictionaries are now created for the user by default if they are not provided.
    • Adaptive sampling does not do any "local" random sampling by default, it just adds the point from the solution
    • Don't use pycalphad.core.utils.generate_dof to create the dof_dict (it is deprecated)
    opened by bocklund 0
  • ENH: Build phase records instead of callables

    ENH: Build phase records instead of callables

    Uses the pycalphad API to pass PhaseRecord dictionaries to calculate and equilibrium to improve the tight-loop performance of equilibrium and Scheil solidification simulations https://github.com/pycalphad/pycalphad/pull/361.

    Building phase records can give a significant performance boost, roughly 10x to 100x speedup in some cases.

    opened by bocklund 0
  • BLD/MAINT: Modernize project metadata

    BLD/MAINT: Modernize project metadata

    • Add pyproject.toml
    • Switch to setuptools_scm instead of versioneer
    • Update installation instructions in README
    • Add automated deployment on Releases
    • Update docs theme to furo
    opened by bocklund 0
  • FIX: Fix removing disordered phase candidates

    FIX: Fix removing disordered phase candidates

    Fixes a regression introduced in #11, where filter_phases was introduced to remove phases that cannot be stable or phases where the disordered part is given as a candidate phase. The change in #11 made it so the disordered phase was not a part of the list of solid_phases that could form during the solidification simulations. With the disordered phase name not included in the solid_phases, the order_disorder_eq_phases function that renamed the ordered phases with disordered configurations to their disordered counterpart would lead to the phase amount of disordered configurations to not be saved.

    This PR fixes that and adds a parameterized test case that tests that the disordered phase always is accounted for regardless of whether or not the ordered phase is in the candidate phases or not.

    opened by bocklund 0
  • FIX: Force exit in equilibrium solidification after a successful binary search

    FIX: Force exit in equilibrium solidification after a successful binary search

    • Exit the equilibrium solidification while loop after a binary search, because the solidification must be converged then by definition (fixes a floating point precision issue where 0.999... < 1 caused the loop to be infinite on some platforms.
    • Update CI for pip version of pycalphad
    • Remove environment.yml development file
    • Drop Python 3.6
    opened by bocklund 0
  • Improve logic for deciding which sublattices are equivalent when checking ordering

    Improve logic for deciding which sublattices are equivalent when checking ordering

    Currently, sublattices in ordered (partitioned) phases are considered equivalent by symmetry if their site ratios are equal. This is a poor heuristic and will fail to determine that sublattices 0 and 1 are equivalent in an FCC_L12 phase with sublattice model [['A', 'B'], ['A', 'B'], ['VA']] with site ratios [0.25, 0.75, 3].

    Relevant for this fix will be the current heuristic in pycalphad models https://github.com/pycalphad/pycalphad/pull/311, and the changes that will occur as a result of fixing https://github.com/pycalphad/pycalphad/issues/345.

    opened by bocklund 0
Releases(0.1.6)
Owner
pycalphad
Computational Thermodynamics in Python
pycalphad
Create a visualization for Trump's Tweeted Words Using Python

Data Trump's Tweeted Words This plot illustrates twitter word occurences. We already did the coding I needed for this plot, so I was very inspired to

7 Mar 27, 2022
Streamlit dashboard examples - Twitter cashtags, StockTwits, WSB, Charts, SQL Pattern Scanner

streamlit-dashboards Streamlit dashboard examples - Twitter cashtags, StockTwits, WSB, Charts, SQL Pattern Scanner Tutorial Video https://ww

122 Dec 21, 2022
Profile and test to gain insights into the performance of your beautiful Python code

Profile and test to gain insights into the performance of your beautiful Python code View Demo - Report Bug - Request Feature QuickPotato in a nutshel

Joey Hendricks 138 Dec 06, 2022
Altair extension for saving charts in a variety of formats.

Altair Saver This packge provides extensions to Altair for saving charts to a variety of output types. Supported output formats are: .json/.vl.json: V

Altair 85 Dec 09, 2022
Pglive - Pglive package adds support for thread-safe live plotting to pyqtgraph

Live pyqtgraph plot Pglive package adds support for thread-safe live plotting to

Martin Domaracký 15 Dec 10, 2022
A little logger for machine learning research

Blinker Blinker provides a fast dispatching system that allows any number of interested parties to subscribe to events, or "signals". Signal receivers

Reinforcement Learning Working Group 27 Dec 03, 2022
Calendar heatmaps from Pandas time series data

Note: See MarvinT/calmap for the maintained version of the project. That is also the version that gets published to PyPI and it has received several f

Martijn Vermaat 195 Dec 22, 2022
Flow-based visual scripting for Python

A simple visual node editor for Python Ryven combines flow-based visual scripting with Python. It gives you absolute freedom for your nodes and a simp

Leon Thomm 3.1k Jan 06, 2023
A tool for creating SVG timelines from simple JSON input.

A tool for creating SVG timelines from simple JSON input.

Jason Reisman 432 Dec 30, 2022
🌀❄️🌩️ This repository contains some examples for creating 2d and 3d weather plots using matplotlib and cartopy libraries in python3.

Weather-Plotting 🌀 ❄️ 🌩️ This repository contains some examples for creating 2d and 3d weather plots using matplotlib and cartopy libraries in pytho

Giannis Dravilas 21 Dec 10, 2022
clock_plot provides a simple way to visualize timeseries data, mapping 24 hours onto the 360 degrees of a polar plot

clock_plot clock_plot provides a simple way to visualize timeseries data mapping 24 hours onto the 360 degrees of a polar plot. For usage, please see

12 Aug 24, 2022
Peloton Stats to Google Sheets with Data Visualization through Seaborn and Plotly

Peloton Stats to Google Sheets with Data Visualization through Seaborn and Plotly Problem: 2 peloton users were looking for a way to track their metri

9 Jul 22, 2022
Domain Connectivity Analysis Tools to analyze aggregate connectivity patterns across a set of domains during security investigations

DomainCAT (Domain Connectivity Analysis Tool) Domain Connectivity Analysis Tool is used to analyze aggregate connectivity patterns across a set of dom

DomainTools 34 Dec 09, 2022
Python Data Validation for Humans™.

validators Python data validation for Humans. Python has all kinds of data validation tools, but every one of them seems to require defining a schema

Konsta Vesterinen 670 Jan 09, 2023
This is a sorting visualizer made with Tkinter.

Sorting-Visualizer This is a sorting visualizer made with Tkinter. Make sure you've installed tkinter in your system to use this visualizer pip instal

Vishal Choubey 7 Jul 06, 2022
3D rendered visualization of the austrian monuments registry

Visualization of the Austrian Monuments Visualization of the monument landscape of the austrian monuments registry (Bundesdenkmalamt Denkmalverzeichni

Nikolai Janakiev 3 Oct 24, 2019
Plot toolbox based on Matplotlib, simple and elegant.

Elegant-Plot Plot toolbox based on Matplotlib, simple and elegant. 绘制效果 绘制过程 数据准备 每种图标类型的目录下有data.csv文件,依据样例数据填入自己的数据。

3 Jul 15, 2022
A napari plugin for visualising and interacting with electron cryotomograms.

napari-tomoslice A napari plugin for visualising and interacting with electron cryotomograms. Installation You can install napari-tomoslice via pip: p

3 Jan 03, 2023
Tools for exploratory data analysis in Python

Dora Exploratory data analysis toolkit for Python. Contents Summary Setup Usage Reading Data & Configuration Cleaning Feature Selection & Extraction V

Nathan Epstein 599 Dec 25, 2022
A comprehensive tutorial for plotting focal mechanism

Focal_Mechanisms_Demo A comprehensive tutorial for plotting focal mechanism "beach-balls" using the PyGMT package for Python. (Resulting map of this d

3 Dec 13, 2022