Dragonfly is an open source python library for scalable Bayesian optimisation.

Overview


Dragonfly is an open source python library for scalable Bayesian optimisation.

Bayesian optimisation is used for optimising black-box functions whose evaluations are usually expensive. Beyond vanilla optimisation techniques, Dragonfly provides an array of tools to scale up Bayesian optimisation to expensive large scale problems. These include features/functionality that are especially suited for high dimensional optimisation (optimising for a large number of variables), parallel evaluations in synchronous or asynchronous settings (conducting multiple evaluations in parallel), multi-fidelity optimisation (using cheap approximations to speed up the optimisation process), and multi-objective optimisation (optimising multiple functions simultaneously).

Dragonfly is compatible with Python2 (>= 2.7) and Python3 (>= 3.5) and has been tested on Linux, macOS, and Windows platforms. For documentation, installation, and a getting started guide, see our readthedocs page. For more details, see our paper.

 

Installation

See here for detailed instructions on installing Dragonfly and its dependencies.

Quick Installation: If you have done this kind of thing before, you should be able to install Dragonfly via pip.

$ sudo apt-get install python-dev python3-dev gfortran # On Ubuntu/Debian
$ pip install numpy
$ pip install dragonfly-opt -v

Testing the Installation: You can import Dragonfly in python to test if it was installed properly. If you have installed via source, make sure that you move to a different directory to avoid naming conflicts.

$ python
>>> from dragonfly import minimise_function
>>> # The first argument below is the function, the second is the domain, and the third is the budget.
>>> min_val, min_pt, history = minimise_function(lambda x: x ** 4 - x**2 + 0.1 * x, [[-10, 10]], 10);  
...
>>> min_val, min_pt
(-0.32122746026750953, array([-0.7129672]))

Due to stochasticity in the algorithms, the above values for min_val, min_pt may be different. If you run it for longer (e.g. min_val, min_pt, history = minimise_function(lambda x: x ** 4 - x**2 + 0.1 * x, [[-10, 10]], 100)), you should get more consistent values for the minimum.

If the installation fails or if there are warning messages, see detailed instructions here.

 

Quick Start

Dragonfly can be used directly in the command line by calling dragonfly-script.py or be imported in python code via the maximise_function function in the main library or in ask-tell mode. To help get started, we have provided some examples in the examples directory. See our readthedocs getting started pages (command line, Python, Ask-Tell) for examples and use cases.

Command line: Below is an example usage in the command line.

$ cd examples
$ dragonfly-script.py --config synthetic/branin/config.json --options options_files/options_example.txt

In Python code: The main APIs for Dragonfly are defined in dragonfly/apis. For their definitions and arguments, see dragonfly/apis/opt.py and dragonfly/apis/moo.py. You can import the main API in python code via,

from dragonfly import minimise_function, maximise_function
func = lambda x: x ** 4 - x**2 + 0.1 * x
domain = [[-10, 10]]
max_capital = 100
min_val, min_pt, history = minimise_function(func, domain, max_capital)
print(min_val, min_pt)
max_val, max_pt, history = maximise_function(lambda x: -func(x), domain, max_capital)
print(max_val, max_pt)

Here, func is the function to be maximised, domain is the domain over which func is to be optimised, and max_capital is the capital available for optimisation. The domain can be specified via a JSON file or in code. See here, here, here, here, here, here, here, here, here, here, and here for more detailed examples.

In Ask-Tell Mode: Ask-tell mode provides you more control over your experiments where you can supply past results to our API in order to obtain a recommendation. See the following example for more details.

For a comprehensive list of uses cases, including multi-objective optimisation, multi-fidelity optimisation, neural architecture search, and other optimisation methods (besides Bayesian optimisation), see our readthe docs pages (command line, Python, Ask-Tell)).

 

Contributors

Kirthevasan Kandasamy: github, webpage
Karun Raju Vysyaraju: github, linkedin
Anthony Yu: github, linkedin
Willie Neiswanger: github, webpage
Biswajit Paria: github, webpage
Chris Collins: github, webpage

Acknowledgements

Research and development of the methods in this package were funded by DOE grant DESC0011114, NSF grant IIS1563887, the DARPA D3M program, and AFRL.

Citation

If you use any part of this code in your work, please cite our JMLR paper.

@article{JMLR:v21:18-223,
  author  = {Kirthevasan Kandasamy and Karun Raju Vysyaraju and Willie Neiswanger and Biswajit Paria and Christopher R. Collins and Jeff Schneider and Barnabas Poczos and Eric P. Xing},
  title   = {Tuning Hyperparameters without Grad Students: Scalable and Robust Bayesian Optimisation with Dragonfly},
  journal = {Journal of Machine Learning Research},
  year    = {2020},
  volume  = {21},
  number  = {81},
  pages   = {1-27},
  url     = {http://jmlr.org/papers/v21/18-223.html}
}

License

This software is released under the MIT license. For more details, please refer LICENSE.txt.

For questions, please email [email protected].

"Copyright 2018-2019 Kirthevasan Kandasamy"

Machine-care - A simple python script to take care of simple maintenance tasks

Machine care An simple python script to take care of simple maintenance tasks fo

2 Jul 10, 2022
Predicting diabetes over a five year period using logistic regression and the Pima First-Nation dataset

Diabetes This script uses the Pima First Nations dataset to create a model to predict whether or not an individual will develop Diabetes Mellitus Type

1 Mar 28, 2022
Python factor analysis library (PCA, CA, MCA, MFA, FAMD)

Prince is a library for doing factor analysis. This includes a variety of methods including principal component analysis (PCA) and correspondence anal

Max Halford 915 Dec 31, 2022
A high performance and generic framework for distributed DNN training

BytePS BytePS is a high performance and general distributed training framework. It supports TensorFlow, Keras, PyTorch, and MXNet, and can run on eith

Bytedance Inc. 3.3k Dec 28, 2022
Apple-voice-recognition - Machine Learning

Apple-voice-recognition Machine Learning How does Siri work? Siri is based on large-scale Machine Learning systems that employ many aspects of data sc

Harshith VH 1 Oct 22, 2021
MosaicML Composer contains a library of methods, and ways to compose them together for more efficient ML training

MosaicML Composer MosaicML Composer contains a library of methods, and ways to compose them together for more efficient ML training. We aim to ease th

MosaicML 2.8k Jan 06, 2023
TIANCHI Purchase Redemption Forecast Challenge

TIANCHI Purchase Redemption Forecast Challenge

Haorui HE 4 Aug 26, 2022
50% faster, 50% less RAM Machine Learning. Numba rewritten Sklearn. SVD, NNMF, PCA, LinearReg, RidgeReg, Randomized, Truncated SVD/PCA, CSR Matrices all 50+% faster

[Due to the time taken @ uni, work + hell breaking loose in my life, since things have calmed down a bit, will continue commiting!!!] [By the way, I'm

Daniel Han-Chen 1.4k Jan 01, 2023
PyNNDescent is a Python nearest neighbor descent for approximate nearest neighbors.

PyNNDescent PyNNDescent is a Python nearest neighbor descent for approximate nearest neighbors. It provides a python implementation of Nearest Neighbo

Leland McInnes 699 Jan 09, 2023
A Python toolbox to churn out organic alkalinity calculations with minimal brain engagement.

Organic Alkalinity Sausage Machine A Python toolbox to churn out organic alkalinity calculations with minimal brain engagement. Getting started To mak

Charles Turner 1 Feb 01, 2022
Tangram makes it easy for programmers to train, deploy, and monitor machine learning models.

Tangram Website | Discord Tangram makes it easy for programmers to train, deploy, and monitor machine learning models. Run tangram train to train a mo

Tangram 1.4k Jan 05, 2023
flexible time-series processing & feature extraction

A corona statistics and information telegram bot.

PreDiCT.IDLab 206 Dec 28, 2022
A machine learning toolkit dedicated to time-series data

tslearn The machine learning toolkit for time series analysis in Python Section Description Installation Installing the dependencies and tslearn Getti

2.3k Dec 29, 2022
Mortality risk prediction for COVID-19 patients using XGBoost models

Mortality risk prediction for COVID-19 patients using XGBoost models Using demographic and lab test data received from the HM Hospitales in Spain, I b

1 Jan 19, 2022
A logistic regression model for health insurance purchasing prediction

Logistic_Regression_Model A logistic regression model for health insurance purchasing prediction This code is using these packages, so please make sur

ShawnWang 1 Nov 29, 2021
Repositório para o #alurachallengedatascience1

1° Challenge de Dados - Alura A Alura Voz é uma empresa de telecomunicação que nos contratou para atuar como cientistas de dados na equipe de vendas.

Sthe Monica 16 Nov 10, 2022
A linear regression model for house price prediction

Linear_Regression_Model A linear regression model for house price prediction. This code is using these packages, so please make sure your have install

ShawnWang 1 Nov 29, 2021
Send rockets to Mars with artificial intelligence(Genetic algorithm) in python.

Send Rockets To Mars With AI Send rockets to Mars with artificial intelligence(Genetic algorithm) in python. Tools Python 3 EasyDraw How to Play Insta

Mohammad Dori 3 Jul 15, 2022
Xeasy-ml is a packaged machine learning framework.

xeasy-ml 1. What is xeasy-ml Xeasy-ml is a packaged machine learning framework. It allows a beginner to quickly build a machine learning model and use

9 Mar 14, 2022