Dragonfly is an open source python library for scalable Bayesian optimisation.

Overview


Dragonfly is an open source python library for scalable Bayesian optimisation.

Bayesian optimisation is used for optimising black-box functions whose evaluations are usually expensive. Beyond vanilla optimisation techniques, Dragonfly provides an array of tools to scale up Bayesian optimisation to expensive large scale problems. These include features/functionality that are especially suited for high dimensional optimisation (optimising for a large number of variables), parallel evaluations in synchronous or asynchronous settings (conducting multiple evaluations in parallel), multi-fidelity optimisation (using cheap approximations to speed up the optimisation process), and multi-objective optimisation (optimising multiple functions simultaneously).

Dragonfly is compatible with Python2 (>= 2.7) and Python3 (>= 3.5) and has been tested on Linux, macOS, and Windows platforms. For documentation, installation, and a getting started guide, see our readthedocs page. For more details, see our paper.

 

Installation

See here for detailed instructions on installing Dragonfly and its dependencies.

Quick Installation: If you have done this kind of thing before, you should be able to install Dragonfly via pip.

$ sudo apt-get install python-dev python3-dev gfortran # On Ubuntu/Debian
$ pip install numpy
$ pip install dragonfly-opt -v

Testing the Installation: You can import Dragonfly in python to test if it was installed properly. If you have installed via source, make sure that you move to a different directory to avoid naming conflicts.

$ python
>>> from dragonfly import minimise_function
>>> # The first argument below is the function, the second is the domain, and the third is the budget.
>>> min_val, min_pt, history = minimise_function(lambda x: x ** 4 - x**2 + 0.1 * x, [[-10, 10]], 10);  
...
>>> min_val, min_pt
(-0.32122746026750953, array([-0.7129672]))

Due to stochasticity in the algorithms, the above values for min_val, min_pt may be different. If you run it for longer (e.g. min_val, min_pt, history = minimise_function(lambda x: x ** 4 - x**2 + 0.1 * x, [[-10, 10]], 100)), you should get more consistent values for the minimum.

If the installation fails or if there are warning messages, see detailed instructions here.

 

Quick Start

Dragonfly can be used directly in the command line by calling dragonfly-script.py or be imported in python code via the maximise_function function in the main library or in ask-tell mode. To help get started, we have provided some examples in the examples directory. See our readthedocs getting started pages (command line, Python, Ask-Tell) for examples and use cases.

Command line: Below is an example usage in the command line.

$ cd examples
$ dragonfly-script.py --config synthetic/branin/config.json --options options_files/options_example.txt

In Python code: The main APIs for Dragonfly are defined in dragonfly/apis. For their definitions and arguments, see dragonfly/apis/opt.py and dragonfly/apis/moo.py. You can import the main API in python code via,

from dragonfly import minimise_function, maximise_function
func = lambda x: x ** 4 - x**2 + 0.1 * x
domain = [[-10, 10]]
max_capital = 100
min_val, min_pt, history = minimise_function(func, domain, max_capital)
print(min_val, min_pt)
max_val, max_pt, history = maximise_function(lambda x: -func(x), domain, max_capital)
print(max_val, max_pt)

Here, func is the function to be maximised, domain is the domain over which func is to be optimised, and max_capital is the capital available for optimisation. The domain can be specified via a JSON file or in code. See here, here, here, here, here, here, here, here, here, here, and here for more detailed examples.

In Ask-Tell Mode: Ask-tell mode provides you more control over your experiments where you can supply past results to our API in order to obtain a recommendation. See the following example for more details.

For a comprehensive list of uses cases, including multi-objective optimisation, multi-fidelity optimisation, neural architecture search, and other optimisation methods (besides Bayesian optimisation), see our readthe docs pages (command line, Python, Ask-Tell)).

 

Contributors

Kirthevasan Kandasamy: github, webpage
Karun Raju Vysyaraju: github, linkedin
Anthony Yu: github, linkedin
Willie Neiswanger: github, webpage
Biswajit Paria: github, webpage
Chris Collins: github, webpage

Acknowledgements

Research and development of the methods in this package were funded by DOE grant DESC0011114, NSF grant IIS1563887, the DARPA D3M program, and AFRL.

Citation

If you use any part of this code in your work, please cite our JMLR paper.

@article{JMLR:v21:18-223,
  author  = {Kirthevasan Kandasamy and Karun Raju Vysyaraju and Willie Neiswanger and Biswajit Paria and Christopher R. Collins and Jeff Schneider and Barnabas Poczos and Eric P. Xing},
  title   = {Tuning Hyperparameters without Grad Students: Scalable and Robust Bayesian Optimisation with Dragonfly},
  journal = {Journal of Machine Learning Research},
  year    = {2020},
  volume  = {21},
  number  = {81},
  pages   = {1-27},
  url     = {http://jmlr.org/papers/v21/18-223.html}
}

License

This software is released under the MIT license. For more details, please refer LICENSE.txt.

For questions, please email [email protected].

"Copyright 2018-2019 Kirthevasan Kandasamy"

Built on python (Mathematical straight fit line coordinates error predictor machine learning foundational model)

Sum-Square_Error-Business-Analytical-Tool- Built on python (Mathematical straight fit line coordinates error predictor machine learning foundational m

om Podey 1 Dec 03, 2021
💀mummify: a version control tool for machine learning

mummify is a version control tool for machine learning. It's simple, fast, and designed for model prototyping.

Max Humber 43 Jul 09, 2022
Programming assignments and quizzes from all courses within the Machine Learning Engineering for Production (MLOps) specialization offered by deeplearning.ai

Machine Learning Engineering for Production (MLOps) Specialization on Coursera (offered by deeplearning.ai) Programming assignments from all courses i

Aman Chadha 173 Jan 05, 2023
Transform ML models into a native code with zero dependencies

m2cgen (Model 2 Code Generator) - is a lightweight library which provides an easy way to transpile trained statistical models into a native code

Bayes' Witnesses 2.3k Jan 03, 2023
Esse é o meu primeiro repo tratando de fim a fim, uma pipeline de dados abertos do governo brasileiro relacionado a compras de contrato e cronogramas anuais com spark, em pyspark e SQL!

Olá! Esse é o meu primeiro repo tratando de fim a fim, uma pipeline de dados abertos do governo brasileiro relacionado a compras de contrato e cronogr

Henrique de Paula 10 Apr 04, 2022
Python package for concise, transparent, and accurate predictive modeling

Python package for concise, transparent, and accurate predictive modeling. All sklearn-compatible and easy to use. 📚 docs • 📖 demo notebooks Modern

Chandan Singh 983 Jan 01, 2023
High performance Python GLMs with all the features!

High performance Python GLMs with all the features!

QuantCo 200 Dec 14, 2022
slim-python is a package to learn customized scoring systems for decision-making problems.

slim-python is a package to learn customized scoring systems for decision-making problems. These are simple decision aids that let users make yes-no p

Berk Ustun 37 Nov 02, 2022
Lseng-iseng eksplor Machine Learning dengan menggunakan library Scikit-Learn

Kalo dengar istilah ML, biasanya rada ambigu. Soalnya punya beberapa kepanjangan, seperti Mobile Legend, Makan Lontong, Ma**ng L*v* dan lain-lain. Tapi pada repo ini membahas Machine Learning :)

Alfiyanto Kondolele 1 Apr 06, 2022
Bayesian Additive Regression Trees For Python

BartPy Introduction BartPy is a pure python implementation of the Bayesian additive regressions trees model of Chipman et al [1]. Reasons to use BART

187 Dec 16, 2022
A Python implementation of GRAIL, a generic framework to learn compact time series representations.

GRAIL A Python implementation of GRAIL, a generic framework to learn compact time series representations. Requirements Python 3.6+ numpy scipy tslearn

3 Nov 24, 2021
Credit Card Fraud Detection, used the credit card fraud dataset from Kaggle

Credit Card Fraud Detection, used the credit card fraud dataset from Kaggle

Sean Zahller 1 Feb 04, 2022
Bayesian optimization based on Gaussian processes (BO-GP) for CFD simulations.

BO-GP Bayesian optimization based on Gaussian processes (BO-GP) for CFD simulations. The BO-GP codes are developed using GPy and GPyOpt. The optimizer

KTH Mechanics 8 Mar 31, 2022
CS 7301: Spring 2021 Course on Advanced Topics in Optimization in Machine Learning

CS 7301: Spring 2021 Course on Advanced Topics in Optimization in Machine Learning

Rishabh Iyer 141 Nov 10, 2022
Model search (MS) is a framework that implements AutoML algorithms for model architecture search at scale.

Model Search Model search (MS) is a framework that implements AutoML algorithms for model architecture search at scale. It aims to help researchers sp

AriesTriputranto 1 Dec 13, 2021
My project contrasts K-Nearest Neighbors and Random Forrest Regressors on Real World data

kNN-vs-RFR My project contrasts K-Nearest Neighbors and Random Forrest Regressors on Real World data In many areas, rental bikes have been launched to

1 Oct 28, 2021
All-in-one web-based development environment for machine learning

All-in-one web-based development environment for machine learning Getting Started • Features & Screenshots • Support • Report a Bug • FAQ • Known Issu

3 Feb 03, 2021
A Multipurpose Library for Synthetic Time Series Generation in Python

TimeSynth Multipurpose Library for Synthetic Time Series Please cite as: J. R. Maat, A. Malali, and P. Protopapas, “TimeSynth: A Multipurpose Library

278 Dec 26, 2022
This project impelemented for midterm of the Machine Learning #Zoomcamp #Alexey Grigorev

MLProject_01 This project impelemented for midterm of the Machine Learning #Zoomcamp #Alexey Grigorev Context Dataset English question data set file F

Hadi Nakhi 1 Dec 18, 2021
Python based GBDT implementation

Py-boost: a research tool for exploring GBDTs Modern gradient boosting toolkits are very complex and are written in low-level programming languages. A

Sberbank AI Lab 20 Sep 21, 2022