Random Walk Graph Neural Networks

Overview

Random Walk Graph Neural Networks

This repository is the official implementation of Random Walk Graph Neural Networks.

Requirements

Code is written in Python 3.6 and requires:

  • PyTorch 1.5
  • scikit-learn 0.21

Datasets

Use the following link to download datasets:

https://ls11-www.cs.tu-dortmund.de/staff/morris/graphkerneldatasets

Extract the datasets into the datasets folder.

Training and Evaluation

To train and evaluate the model in the paper, run this command:

python main.py --dataset <dataset_name> 

Example

To train and evaluate the model on MUTAG, first specify the hyperparameters in the main.py file and then run:

python main.py --dataset MUTAG --use-node-labels

Results

Our model achieves the following performance on standard graph classification datasets (note that we used the evaluation procedure and same data splits as in this paper):

Model name MUTAG D&D NCI1 PROTEINS ENZYMES
SP 80.2 (± 6.5) 78.1 (± 4.1) 72.7 (± 1.4) 75.3 (± 3.8) 38.3 (± 8.0)
GR 80.8 (± 6.4) 75.4 (± 3.4) 61.8 (± 1.7) 71.6 (± 3.1) 25.1 (± 4.4)
WL 84.6 (± 8.3) 78.1 (± 2.4) 84.8 (± 2.5) 73.8 (± 4.4) 50.3 (± 5.7)
DGCNN 84.0 (± 6.7) 76.6 (± 4.3) 76.4 (± 1.7) 72.9 (± 3.5) 38.9 (± 5.7)
DiffPool 79.8 (± 7.1) 75.0 (± 3.5) 76.9 (± 1.9) 73.7 (± 3.5) 59.5 (± 5.6)
ECC 75.4 (± 6.2) 72.6 (± 4.1) 76.2 (± 1.4) 72.3 (± 3.4) 29.5 (± 8.2)
GIN 84.7 (± 6.7) 75.3 (± 2.9) 80.0 (± 1.4) 73.3 (± 4.0) 59.6 (± 4.5)
GraphSAGE 83.6 (± 9.6) 72.9 (± 2.0) 76.0 (± 1.8) 73.0 (± 4.5) 58.2 (± 6.0)
1-step RWNN 89.2 (± 4.3) 77.6 (± 4.7) 71.4 (± 1.8) 74.7 (± 3.3) 56.7 (± 5.2)
2-step RWNN 88.1 (± 4.8) 76.9 (± 4.6) 73.0 (± 2.0) 74.1 (± 2.8) 57.4 (± 4.9)
3-step RWNN 88.6 (± 4.1) 77.4 (± 4.9) 73.9 (± 1.3) 74.3 (± 3.3) 57.6 (± 6.3)
Model name IMDB-BINARY IMDB-MULTI REDDIT-BINARY REDDIT-MULTI-5K COLLAB
SP 57.7 (± 4.1) 39.8 (± 3.7) 89.0 (± 1.0) 51.1 (± 2.2) 79.9 (± 2.7)
GR 63.3 (± 2.7) 39.6 (± 3.0) 76.6 (± 3.3) 38.1 (± 2.3) 71.1 (± 1.4)
WL 72.8 (± 4.5) 51.2 (± 6.5) 74.9 (± 1.8) 49.6 (± 2.0) 78.0 (± 2.0)
DGCNN 69.2 (± 3.0) 45.6 (± 3.4) 87.8 (± 2.5) 49.2 (± 1.2) 71.2 (± 1.9)
DiffPool 68.4 (± 3.3) 45.6 (± 3.4) 89.1 (± 1.6) 53.8 (± 1.4) 68.9 (± 2.0)
ECC 67.7 (± 2.8) 43.5 (± 3.1) OOR OOR OOR
GIN 71.2 (± 3.9) 48.5 (± 3.3) 89.9 (± 1.9) 56.1 (± 1.7) 75.6 (± 2.3)
GraphSAGE 68.8 (± 4.5) 47.6 (± 3.5) 84.3 (± 1.9) 50.0 (± 1.3) 73.9 (± 1.7)
1-step RWNN 70.8 (± 4.8) 47.8 (± 3.8) 90.4 (± 1.9) 51.7 (± 1.5) 71.7 (± 2.1)
2-step RWNN 70.6 (± 4.4) 48.8 (± 2.9) 90.3 (± 1.8) 51.7 (± 1.4) 71.3 (± 2.1)
3-step RWNN 70.7 (± 3.9) 47.8 (± 3.5) 89.7 (± 1.2) 53.4 (± 1.6) 71.9 (± 2.5)

Cite

Please cite our paper if you use this code:

@inproceedings{nikolentzos2020random,
  title={Random Walk Graph Neural Networks},
  author={Nikolentzos, Giannis and Vazirgiannis, Michalis},
  booktitle={Proceedings of the 34th Conference on Neural Information Processing Systems},
  pages={16211--16222},
  year={2020}
}
Owner
Giannis Nikolentzos
Giannis Nikolentzos
Aerial Imagery dataset for fire detection: classification and segmentation (Unmanned Aerial Vehicle (UAV))

Aerial Imagery dataset for fire detection: classification and segmentation using Unmanned Aerial Vehicle (UAV) Title FLAME (Fire Luminosity Airborne-b

79 Jan 06, 2023
Algorithmic trading with deep learning experiments

Deep-Trading Algorithmic trading with deep learning experiments. Now released part one - simple time series forecasting. I plan to implement more soph

Alex Honchar 1.4k Jan 02, 2023
An implementation of Fastformer: Additive Attention Can Be All You Need in TensorFlow

Fast Transformer This repo implements Fastformer: Additive Attention Can Be All You Need by Wu et al. in TensorFlow. Fast Transformer is a Transformer

Rishit Dagli 139 Dec 28, 2022
Contains code for Deep Kernelized Dense Geometric Matching

DKM - Deep Kernelized Dense Geometric Matching Contains code for Deep Kernelized Dense Geometric Matching We provide pretrained models and code for ev

Johan Edstedt 83 Dec 23, 2022
EMNLP 2021 Adapting Language Models for Zero-shot Learning by Meta-tuning on Dataset and Prompt Collections

Adapting Language Models for Zero-shot Learning by Meta-tuning on Dataset and Prompt Collections Ruiqi Zhong, Kristy Lee*, Zheng Zhang*, Dan Klein EMN

Ruiqi Zhong 42 Nov 03, 2022
The project was to detect traffic signs, based on the Megengine framework.

trafficsign 赛题 旷视AI智慧交通开源赛道,初赛1/177,复赛1/12。 本赛题为复杂场景的交通标志检测,对五种交通标志进行识别。 框架 megengine 算法方案 网络框架 atss + resnext101_32x8d 训练阶段 图片尺寸 最终提交版本输入图片尺寸为(1500,2

20 Dec 02, 2022
Neural style transfer as a class in PyTorch

pt-styletransfer Neural style transfer as a class in PyTorch Based on: https://github.com/alexis-jacq/Pytorch-Tutorials Adds: StyleTransferNet as a cl

Tyler Kvochick 31 Jun 27, 2022
A package related to building quasi-fibration symmetries

qf A package related to building quasi-fibration symmetries. If you'd like to learn more about how it works, see the brief explanation and References

Paolo Boldi 1 Dec 01, 2021
The repository contain code for building compiler using puthon.

Building Compiler This is a python implementation of JamieBuild's "Super Tiny Compiler" Overview JamieBuilds developed a wonderfully educative compile

Shyam Das Shrestha 1 Nov 21, 2021
Uses OpenCV and Python Code to detect a face on the screen

Simple-Face-Detection This code uses OpenCV and Python Code to detect a face on the screen. This serves as an example program. Important prerequisites

Denis Woolley (CreepyD) 1 Feb 12, 2022
Deep RGB-D Saliency Detection with Depth-Sensitive Attention and Automatic Multi-Modal Fusion (CVPR'2021, Oral)

DSA^2 F: Deep RGB-D Saliency Detection with Depth-Sensitive Attention and Automatic Multi-Modal Fusion (CVPR'2021, Oral) This repo is the official imp

如今我已剑指天涯 46 Dec 21, 2022
Implementation of Research Paper "Learning to Enhance Low-Light Image via Zero-Reference Deep Curve Estimation"

Zero-DCE and Zero-DCE++(Lite architechture for Mobile and edge Devices) Papers Abstract The paper presents a novel method, Zero-Reference Deep Curve E

Tauhid Khan 15 Dec 10, 2022
AugLiChem - The augmentation library for chemical systems.

AugLiChem Welcome to AugLiChem! The augmentation library for chemical systems. This package supports augmentation for both crystaline and molecular sy

BaratiLab 17 Jan 08, 2023
A curated list of the latest breakthroughs in AI (in 2021) by release date with a clear video explanation, link to a more in-depth article, and code.

2021: A Year Full of Amazing AI papers- A Review 📌 A curated list of the latest breakthroughs in AI by release date with a clear video explanation, l

Louis-François Bouchard 2.9k Dec 31, 2022
Deep learning for Engineers - Physics Informed Deep Learning

SciANN: Neural Networks for Scientific Computations SciANN is a Keras wrapper for scientific computations and physics-informed deep learning. New to S

SciANN 195 Jan 03, 2023
A JAX-based research framework for writing differentiable numerical simulators with arbitrary discretizations

jaxdf - JAX-based Discretization Framework Overview | Example | Installation | Documentation ⚠️ This library is still in development. Breaking changes

UCL Biomedical Ultrasound Group 65 Dec 23, 2022
Pytorch implementation for "Adversarial Robustness under Long-Tailed Distribution" (CVPR 2021 Oral)

Adversarial Long-Tail This repository contains the PyTorch implementation of the paper: Adversarial Robustness under Long-Tailed Distribution, CVPR 20

Tong WU 89 Dec 15, 2022
A PyTorch Toolbox for Face Recognition

FaceX-Zoo FaceX-Zoo is a PyTorch toolbox for face recognition. It provides a training module with various supervisory heads and backbones towards stat

JDAI-CV 1.6k Jan 06, 2023
PyTorch Implementation of our paper Explain Me the Painting: Multi-Topic Knowledgeable Art Description Generation

PyTorch Implementation of our paper Explain Me the Painting: Multi-Topic Knowledgeable Art Description Generation

Zechen Bai 12 Jul 08, 2022
Two types of Recommender System : Content-based Recommender System and Colaborating filtering based recommender system

Recommender-Systems Two types of Recommender System : Content-based Recommender System and Colaborating filtering based recommender system So the data

Yash Kumar 0 Jan 20, 2022