An open-source Deep Learning Engine for Healthcare that aims to treat & prevent major diseases

Overview

AlphaCare

AlphaCare

Background

AlphaCare is a work-in-progress, open-source Deep Learning Engine for Healthcare that aims to treat and prevent major diseases. The goal is to eventually target the root cause of all disease, aging. We'll be building new features every week as a community and in the process, learn about all the potential ways that Deep Learning can be used in Healthcare.

Coding Challenge (Due Date: October 7, 2021 at 12 PM PST)

Use DeepMind's Perceiver IO model to classify any type of Medical Image (CT scans, Brain Scans, etc.). You can use the alphacare notebook in the computer vision folder as a starting point, labeled "perceiver". Submit your code to this link and post a classified image example on your favorite social network with the hashtag #AlphaCare. I'll announce the winner in 2 weeks, and we'll integrate their code into this repository. AlphaCare will become more and more multi-purpose as we continually add capabilities to it.

Submission Link

Dependencies

  • keras
  • tensorflow
  • pywt (pip install PyWavelets)
  • scipy
  • sklearn
  • matplotlib
  • csv
  • numpy
  • pandas
  • os
  • itertools
  • collections

Use pip install to install each dependency.

example:

pip install scipy

Instructions

After installing each dependency, go to the Computer Vision folder and open the notebook titled AlphaCare_Notebook_v1 via jupyter notebook or upload it to google colab. The Dataset used is theMIT BIH dataset.

TODOs (Pull requests are encouraged

  • Computer Vision Notebook for ECG Classification
  • Integrate notebook into Flask web app (in progress)
  • Visualize each ECG signal in real-time
  • Add NLP module for Electronic Health Record interpretation
  • Chatbot for Diagnostic Recommendations
  • Data Generation for improved accuracy in text, image, and numeric classification
  • Add Reinforcement Learning engine for real-time predictions on biometric data streams
  • Add Patient privacy preservation functionality via Ethereum Blockchain
  • Add Quantum Machine Learning use case
  • Create Integration pre processing file to allow end to end prediction using any type of data

Credits

The credits for this code go to Yomnahesham, Keshav Boudaria, and MIT for their dataset. More credits will be added as we integrate more open source repositories into our code base.

Owner
Siraj Raval
subscribe to my youtube channel! www.youtube.com/c/sirajraval
Siraj Raval
PanopticBEV - Bird's-Eye-View Panoptic Segmentation Using Monocular Frontal View Images

Bird's-Eye-View Panoptic Segmentation Using Monocular Frontal View Images This r

63 Dec 16, 2022
PyTorch implementation of DeepLab v2 on COCO-Stuff / PASCAL VOC

DeepLab with PyTorch This is an unofficial PyTorch implementation of DeepLab v2 [1] with a ResNet-101 backbone. COCO-Stuff dataset [2] and PASCAL VOC

Kazuto Nakashima 995 Jan 08, 2023
Official PyTorch implementation of the paper: Improving Graph Neural Network Expressivity via Subgraph Isomorphism Counting.

Improving Graph Neural Network Expressivity via Subgraph Isomorphism Counting Official PyTorch implementation of the paper: Improving Graph Neural Net

Giorgos Bouritsas 58 Dec 31, 2022
Visyerres sgdf woob - Modules Woob pour l'intranet et autres sites Scouts et Guides de France

Vis'Yerres SGDF - Modules Woob Vous avez le sentiment que l'intranet des Scouts

Thomas Touhey (pas un pseudonyme) 3 Dec 24, 2022
[ICLR 2021] HW-NAS-Bench: Hardware-Aware Neural Architecture Search Benchmark

HW-NAS-Bench: Hardware-Aware Neural Architecture Search Benchmark Accepted as a spotlight paper at ICLR 2021. Table of content File structure Prerequi

72 Jan 03, 2023
Finetune SSL models for MOS prediction

Finetune SSL models for MOS prediction This is code for our paper under review for ICASSP 2022: "Generalization Ability of MOS Prediction Networks" Er

Yamagishi and Echizen Laboratories, National Institute of Informatics 32 Nov 22, 2022
Self-Supervised Vision Transformers Learn Visual Concepts in Histopathology (LMRL Workshop, NeurIPS 2021)

Self-Supervised Vision Transformers Learn Visual Concepts in Histopathology Self-Supervised Vision Transformers Learn Visual Concepts in Histopatholog

Richard Chen 95 Dec 24, 2022
Mini Software that give reminder to drink water as per your weight.

Water Notification Desktop Python The Mini Software built in Python (tkinter) that will remind you to drink water on specific time span based on your

Om Jogani 5 Dec 16, 2022
RaceBERT -- A transformer based model to predict race and ethnicty from names

RaceBERT -- A transformer based model to predict race and ethnicty from names Installation pip install racebert Using a virtual environment is highly

Prasanna Parasurama 3 Nov 02, 2022
Implementation of the paper "Generating Symbolic Reasoning Problems with Transformer GANs"

Generating Symbolic Reasoning Problems with Transformer GANs This is the implementation of the paper Generating Symbolic Reasoning Problems with Trans

Reactive Systems Group 1 Apr 18, 2022
PyTorch code accompanying our paper on Maximum Entropy Generators for Energy-Based Models

Maximum Entropy Generators for Energy-Based Models All experiments have tensorboard visualizations for samples / density / train curves etc. To run th

Rithesh Kumar 135 Oct 27, 2022
Learning Intents behind Interactions with Knowledge Graph for Recommendation, WWW2021

Learning Intents behind Interactions with Knowledge Graph for Recommendation This is our PyTorch implementation for the paper: Xiang Wang, Tinglin Hua

158 Dec 15, 2022
PocketNet: Extreme Lightweight Face Recognition Network using Neural Architecture Search and Multi-Step Knowledge Distillation

PocketNet This is the official repository of the paper: PocketNet: Extreme Lightweight Face Recognition Network using Neural Architecture Search and M

Fadi Boutros 40 Dec 22, 2022
Conceptual 12M is a dataset containing (image-URL, caption) pairs collected for vision-and-language pre-training.

Conceptual 12M We introduce the Conceptual 12M (CC12M), a dataset with ~12 million image-text pairs meant to be used for vision-and-language pre-train

Google Research Datasets 226 Dec 07, 2022
On the Complementarity between Pre-Training and Back-Translation for Neural Machine Translation (Findings of EMNLP 2021))

PTvsBT On the Complementarity between Pre-Training and Back-Translation for Neural Machine Translation (Findings of EMNLP 2021) Citation Please cite a

Sunbow Liu 10 Nov 25, 2022
Mmdet benchmark with python

mmdet_benchmark 本项目是为了研究 mmdet 推断性能瓶颈,并且对其进行优化。 配置与环境 机器配置 CPU:Intel(R) Core(TM) i9-10900K CPU @ 3.70GHz GPU:NVIDIA GeForce RTX 3080 10GB 内存:64G 硬盘:1T

杨培文 (Yang Peiwen) 24 May 21, 2022
Code for the paper "M2m: Imbalanced Classification via Major-to-minor Translation" (CVPR 2020)

M2m: Imbalanced Classification via Major-to-minor Translation This repository contains code for the paper "M2m: Imbalanced Classification via Major-to

79 Oct 13, 2022
LONG-TERM SERIES FORECASTING WITH QUERYSELECTOR – EFFICIENT MODEL OF SPARSEATTENTION

Query Selector Here you can find code and data loaders for the paper https://arxiv.org/pdf/2107.08687v1.pdf . Query Selector is a novel approach to sp

MORAI 62 Dec 17, 2022
Codebase for Attentive Neural Hawkes Process (A-NHP) and Attentive Neural Datalog Through Time (A-NDTT)

Introduction Codebase for the paper Transformer Embeddings of Irregularly Spaced Events and Their Participants. This codebase contains two packages: a

Alan Yang 28 Dec 12, 2022
FairMOT - A simple baseline for one-shot multi-object tracking

FairMOT - A simple baseline for one-shot multi-object tracking

Yifu Zhang 3.6k Jan 08, 2023