Draw interactive NetworkX graphs with Altair

Overview

nx_altair

Draw NetworkX graphs with Altair

Gitter chat

nx_altair offers a similar draw API to NetworkX but returns Altair Charts instead.

If you'd like to contribute, join the Gitter chatroom and share your ideas! Also, checkout the to-do list below.

Examples

If you'd like to start playing with nx_altair, download this notebook!

Simple graph

import networkx as nx
import nx_altair as nxa

# Generate a random graph
G = nx.fast_gnp_random_graph(n=20, p=0.25)

# Compute positions for viz.
pos = nx.spring_layout(G)

# Draw the graph using Altair
viz = nxa.draw_networkx(G, pos=pos)

# Show it as an interactive plot!
viz.interactive()

Leverage Altair

Customize the visualization

nx_altair also supports many of the same arguments from NetworkX for styling your network--with an Altair twist! Map visualization attributes in a declarative manner.

import numpy as np

# Add weights to nodes and edges
for n in G.nodes():
    G.nodes[n]['weight'] = np.random.randn()

for e in G.edges():
    G.edges[e]['weight'] = np.random.uniform(1, 10)


# Draw the graph using Altair
viz = nxa.draw_networkx(
    G, pos=pos,
    node_color='weight',
    cmap='viridis',
    width='weight',
    edge_color='black',
)

# Show it as an interactive plot!
viz.interactive()

Install

To install from PyPI:

pip install nx_altair

To install for development, clone this repos and install using pip

pip install -e .

Contributing

We welcome pull requests! If you find a bug, we'd love for you to submit a PR. If you're not sure how to do that, check out this simple guide.

If you have a feature request, please open an issue or submit a PR!

Todo list

A list of things to-do (good ideas for PRs).

  • Add draw method that mirrors networkx (easy)
  • Node color scale vmix, vmax (easy)
  • Edge color scale vmix, vmax (easy)
  • Node labels (medium)
  • Edge labels (medium)
  • Mouse-hover interactivity (medium)
  • Arrows for edges (hard)
  • Support for large (>1000 edge) networks (hard)
  • Force-directed interactivity (very hard---beyond altair's current support).
Owner
Zachary Sailer
@jupyter core developer, @jupyter Distinguished Contributor
Zachary Sailer
Tidy data structures, summaries, and visualisations for missing data

naniar naniar provides principled, tidy ways to summarise, visualise, and manipulate missing data with minimal deviations from the workflows in ggplot

Nicholas Tierney 611 Dec 22, 2022
Resources for teaching & learning practical data visualization with python.

Practical Data Visualization with Python Overview All views expressed on this site are my own and do not represent the opinions of any entity with whi

Paul Jeffries 98 Sep 24, 2022
Python implementation of the Density Line Chart by Moritz & Fisher.

PyDLC - Density Line Charts with Python Python implementation of the Density Line Chart (Moritz & Fisher, 2018) to visualize large collections of time

Charles L. Bérubé 10 Jan 06, 2023
Collection of data visualizing projects through Tableau, Data Wrapper, and Power BI

Data-Visualization-Projects Collection of data visualizing projects through Tableau, Data Wrapper, and Power BI Indigenous-Brands-Social-Movements Pyt

Jinwoo(Roy) Yoon 1 Feb 05, 2022
Show Data: Show your dataset in web browser!

Show Data is to generate html tables for large scale image dataset, especially for the dataset in remote server. It provides some useful commond line tools and fully customizeble API reference to gen

Dechao Meng 83 Nov 26, 2022
A set of useful perceptually uniform colormaps for plotting scientific data

Colorcet: Collection of perceptually uniform colormaps Build Status Coverage Latest dev release Latest release Docs What is it? Colorcet is a collecti

HoloViz 590 Dec 31, 2022
Tandem Mass Spectrum Prediction with Graph Transformers

MassFormer This is the original implementation of MassFormer, a graph transformer for small molecule MS/MS prediction. Check out the preprint on arxiv

Röst Lab 13 Oct 27, 2022
Simple Inkscape Scripting

Simple Inkscape Scripting Description In the Inkscape vector-drawing program, how would you go about drawing 100 diamonds, each with a random color an

Scott Pakin 140 Dec 27, 2022
A Python Library for Self Organizing Map (SOM)

SOMPY A Python Library for Self Organizing Map (SOM) As much as possible, the structure of SOM is similar to somtoolbox in Matlab. It has the followin

Vahid Moosavi 497 Dec 29, 2022
Extract and visualize information from Gurobi log files

GRBlogtools Extract information from Gurobi log files and generate pandas DataFrames or Excel worksheets for further processing. Also includes a wrapp

Gurobi Optimization 56 Nov 17, 2022
Plotting data from the landroid and a raspberry pi zero to a influx-db

landroid-pi-influx Plotting data from the landroid and a raspberry pi zero to a influx-db Dependancies Hardware: Landroid WR130E Raspberry Pi Zero Wif

2 Oct 22, 2021
Create SVG drawings from vector geodata files (SHP, geojson, etc).

SVGIS Create SVG drawings from vector geodata files (SHP, geojson, etc). SVGIS is great for: creating small multiples, combining lots of datasets in a

Neil Freeman 78 Dec 09, 2022
Drug design and development team HackBio internship is a virtual bioinformatics program that introduces students and professional to advanced practical bioinformatics and its applications globally.

-Nyokong. Drug design and development team HackBio internship is a virtual bioinformatics program that introduces students and professional to advance

4 Aug 04, 2022
Scientific measurement library for instruments, experiments, and live-plotting

PyMeasure scientific package PyMeasure makes scientific measurements easy to set up and run. The package contains a repository of instrument classes a

PyMeasure 445 Jan 04, 2023
Here I plotted data for the average test scores across schools and class sizes across school districts.

HW_02 Here I plotted data for the average test scores across schools and class sizes across school districts. Average Test Score by Race This graph re

7 Oct 27, 2021
🐞 📊 Ladybug extension to generate 2D charts

ladybug-charts Ladybug extension to generate 2D charts. Installation pip install ladybug-charts QuickStart import ladybug_charts API Documentation Loc

Ladybug Tools 3 Dec 30, 2022
Data Visualization Guide for Presentations, Reports, and Dashboards

This is a highly practical and example-based guide on visually representing data in reports and dashboards.

Anton Zhiyanov 395 Dec 29, 2022
Manim is an animation engine for explanatory math videos.

A community-maintained Python framework for creating mathematical animations.

12.4k Dec 30, 2022
Quickly and accurately render even the largest data.

Turn even the largest data into images, accurately Build Status Coverage Latest dev release Latest release Docs Support What is it? Datashader is a da

HoloViz 2.9k Dec 28, 2022
This package creates clean and beautiful matplotlib plots that work on light and dark backgrounds

This package creates clean and beautiful matplotlib plots that work on light and dark backgrounds. Inspired by the work of Edward Tufte.

Nico Schlömer 205 Jan 07, 2023