Framework for fine-tuning pretrained transformers for Named-Entity Recognition (NER) tasks

Related tags

Text Data & NLPNERDA
Overview

NERDA

Build status codecov PyPI PyPI - Downloads License

Not only is NERDA a mesmerizing muppet-like character. NERDA is also a python package, that offers a slick easy-to-use interface for fine-tuning pretrained transformers for Named Entity Recognition (=NER) tasks.

You can also utilize NERDA to access a selection of precooked NERDA models, that you can use right off the shelf for NER tasks.

NERDA is built on huggingface transformers and the popular pytorch framework.

Installation guide

NERDA can be installed from PyPI with

pip install NERDA

If you want the development version then install directly from GitHub.

Named-Entity Recogntion tasks

Named-entity recognition (NER) (also known as (named) entity identification, entity chunking, and entity extraction) is a subtask of information extraction that seeks to locate and classify named entities mentioned in unstructured text into pre-defined categories such as person names, organizations, locations, medical codes, time expressions, quantities, monetary values, percentages, etc.1

Example Task:

Task

Identify person names and organizations in text:

Jim bought 300 shares of Acme Corp.

Solution

Named Entity Type
'Jim' Person
'Acme Corp.' Organization

Read more about NER on Wikipedia.

Train Your Own NERDA Model

Say, we want to fine-tune a pretrained Multilingual BERT transformer for NER in English.

Load package.

from NERDA.models import NERDA

Instantiate a NERDA model (with default settings) for the CoNLL-2003 English NER data set.

from NERDA.datasets import get_conll_data
model = NERDA(dataset_training = get_conll_data('train'),
              dataset_validation = get_conll_data('valid'),
              transformer = 'bert-base-multilingual-uncased')

By default the network architecture is analogous to that of the models in Hvingelby et al. 2020.

The model can then be trained/fine-tuned by invoking the train method, e.g.

model.train()

Note: this will take some time depending on the dimensions of your machine (if you want to skip training, you can go ahead and use one of the models, that we have already precooked for you in stead).

After the model has been trained, the model can be used for predicting named entities in new texts.

# text to identify named entities in.
text = 'Old MacDonald had a farm'
model.predict_text(text)
([['Old', 'MacDonald', 'had', 'a', 'farm']], [['B-PER', 'I-PER', 'O', 'O', 'O']])

This means, that the model identified 'Old MacDonald' as a PERson.

Please note, that the NERDA model configuration above was instantiated with all default settings. You can however customize your NERDA model in a lot of ways:

  • Use your own data set (finetune a transformer for any given language)
  • Choose whatever transformer you like
  • Set all of the hyperparameters for the model
  • You can even apply your own Network Architecture

Read more about advanced usage of NERDA in the detailed documentation.

Use a Precooked NERDA model

We have precooked a number of NERDA models for Danish and English, that you can download and use right off the shelf.

Here is an example.

Instantiate a multilingual BERT model, that has been finetuned for NER in Danish, DA_BERT_ML.

from NERDA.precooked import DA_BERT_ML()
model = DA_BERT_ML()

Down(load) network from web:

model.download_network()
model.load_network()

You can now predict named entities in new (Danish) texts

# (Danish) text to identify named entities in:
# 'Jens Hansen har en bondegård' = 'Old MacDonald had a farm'
text = 'Jens Hansen har en bondegård'
model.predict_text(text)
([['Jens', 'Hansen', 'har', 'en', 'bondegård']], [['B-PER', 'I-PER', 'O', 'O', 'O']])

List of Precooked Models

The table below shows the precooked NERDA models publicly available for download.

Model Language Transformer Dataset F1-score
DA_BERT_ML Danish Multilingual BERT DaNE 82.8
DA_ELECTRA_DA Danish Danish ELECTRA DaNE 79.8
EN_BERT_ML English Multilingual BERT CoNLL-2003 90.4
EN_ELECTRA_EN English English ELECTRA CoNLL-2003 89.1

F1-score is the micro-averaged F1-score across entity tags and is evaluated on the respective test sets (that have not been used for training nor validation of the models).

Note, that we have not spent a lot of time on actually fine-tuning the models, so there could be room for improvement. If you are able to improve the models, we will be happy to hear from you and include your NERDA model.

Model Performance

The table below summarizes the performance (F1-scores) of the precooked NERDA models.

Level DA_BERT_ML DA_ELECTRA_DA EN_BERT_ML EN_ELECTRA_EN
B-PER 93.8 92.0 96.0 95.1
I-PER 97.8 97.1 98.5 97.9
B-ORG 69.5 66.9 88.4 86.2
I-ORG 69.9 70.7 85.7 83.1
B-LOC 82.5 79.0 92.3 91.1
I-LOC 31.6 44.4 83.9 80.5
B-MISC 73.4 68.6 81.8 80.1
I-MISC 86.1 63.6 63.4 68.4
AVG_MICRO 82.8 79.8 90.4 89.1
AVG_MACRO 75.6 72.8 86.3 85.3

'NERDA'?

'NERDA' originally stands for 'Named Entity Recognition for DAnish'. However, this is somewhat misleading, since the functionality is no longer limited to Danish. On the contrary it generalizes to all other languages, i.e. NERDA supports fine-tuning of transformers for NER tasks for any arbitrary language.

Background

NERDA is developed as a part of Ekstra Bladet’s activities on Platform Intelligence in News (PIN). PIN is an industrial research project that is carried out in collaboration between the Technical University of Denmark, University of Copenhagen and Copenhagen Business School with funding from Innovation Fund Denmark. The project runs from 2020-2023 and develops recommender systems and natural language processing systems geared for news publishing, some of which are open sourced like NERDA.

Shout-outs

Read more

The detailed documentation for NERDA including code references and extended workflow examples can be accessed here.

Contact

We hope, that you will find NERDA useful.

Please direct any questions and feedbacks to us!

If you want to contribute (which we encourage you to), open a PR.

If you encounter a bug or want to suggest an enhancement, please open an issue.

Owner
Ekstra Bladet
GitHub of Ekstra Bladet Analyse
Ekstra Bladet
Easy, fast, effective, and automatic g-code compression!

Getting to the meat of g-code. Easy, fast, effective, and automatic g-code compression! MeatPack nearly doubles the effective data rate of a standard

Scott Mudge 97 Nov 21, 2022
Deep Learning for Natural Language Processing - Lectures 2021

This repository contains slides for the course "20-00-0947: Deep Learning for Natural Language Processing" (Technical University of Darmstadt, Summer term 2021).

0 Feb 21, 2022
SciBERT is a BERT model trained on scientific text.

SciBERT is a BERT model trained on scientific text.

AI2 1.2k Dec 24, 2022
Convolutional Neural Networks for Sentence Classification

Convolutional Neural Networks for Sentence Classification Code for the paper Convolutional Neural Networks for Sentence Classification (EMNLP 2014). R

Yoon Kim 2k Jan 02, 2023
Python code for ICLR 2022 spotlight paper EViT: Expediting Vision Transformers via Token Reorganizations

Expediting Vision Transformers via Token Reorganizations This repository contain

Youwei Liang 101 Dec 26, 2022
Simple Annotated implementation of GPT-NeoX in PyTorch

Simple Annotated implementation of GPT-NeoX in PyTorch This is a simpler implementation of GPT-NeoX in PyTorch. We have taken out several optimization

labml.ai 101 Dec 03, 2022
Few-shot Natural Language Generation for Task-Oriented Dialog

Few-shot Natural Language Generation for Task-Oriented Dialog This repository contains the dataset, source code and trained model for the following pa

172 Dec 13, 2022
Wrapper to display a script output or a text file content on the desktop in sway or other wlroots-based compositors

nwg-wrapper This program is a part of the nwg-shell project. This program is a GTK3-based wrapper to display a script output, or a text file content o

Piotr Miller 94 Dec 27, 2022
SGMC: Spectral Graph Matrix Completion

SGMC: Spectral Graph Matrix Completion Code for AAAI21 paper "Scalable and Explainable 1-Bit Matrix Completion via Graph Signal Learning". Data Format

Chao Chen 8 Dec 12, 2022
Speach Recognitions

easy_meeting Добро пожаловать в интерфейс сервиса автопротоколирования совещаний Easy Meeting. Website - http://cf5c-62-192-251-83.ngrok.io/ Принципиа

Maksim 3 Feb 18, 2022
Fuzzy String Matching in Python

FuzzyWuzzy Fuzzy string matching like a boss. It uses Levenshtein Distance to calculate the differences between sequences in a simple-to-use package.

SeatGeek 8.8k Jan 01, 2023
Translators - is a library which aims to bring free, multiple, enjoyable translation to individuals and students in Python

Translators - is a library which aims to bring free, multiple, enjoyable translation to individuals and students in Python

UlionTse 907 Dec 27, 2022
A simple command line tool for text to image generation, using OpenAI's CLIP and a BigGAN

artificial intelligence cosmic love and attention fire in the sky a pyramid made of ice a lonely house in the woods marriage in the mountains lantern

Phil Wang 2.3k Jan 01, 2023
This repository contains data used in the NAACL 2021 Paper - Proteno: Text Normalization with Limited Data for Fast Deployment in Text to Speech Systems

Proteno This is the data release associated with the corresponding NAACL 2021 Paper - Proteno: Text Normalization with Limited Data for Fast Deploymen

37 Dec 04, 2022
This project aims to conduct a text information retrieval and text mining on medical research publication regarding Covid19 - treatments and vaccinations.

Project: Text Analysis - This project aims to conduct a text information retrieval and text mining on medical research publication regarding Covid19 -

1 Mar 14, 2022
BERT Attention Analysis

BERT Attention Analysis This repository contains code for What Does BERT Look At? An Analysis of BERT's Attention. It includes code for getting attent

Kevin Clark 401 Dec 11, 2022
Exploring dimension-reduced embeddings

sleepwalk Exploring dimension-reduced embeddings This is the code repository. See here for the Sleepwalk web page. License and disclaimer This program

S. Anders's research group at ZMBH 91 Nov 29, 2022
A pytorch implementation of the ACL2019 paper "Simple and Effective Text Matching with Richer Alignment Features".

RE2 This is a pytorch implementation of the ACL 2019 paper "Simple and Effective Text Matching with Richer Alignment Features". The original Tensorflo

286 Jan 02, 2023
CoNLL-English NER Task (NER in English)

CoNLL-English NER Task en | ch Motivation Course Project review the pytorch framework and sequence-labeling task practice using the transformers of Hu

Kevin 2 Jan 14, 2022
HAN2HAN : Hangul Font Generation

HAN2HAN : Hangul Font Generation

Changwoo Lee 36 Dec 28, 2022