Cross-Document Coreference Resolution

Related tags

Deep Learningcoref
Overview

Cross-Document Coreference Resolution

This repository contains code and models for end-to-end cross-document coreference resolution, as decribed in our papers:

The models are trained on ECB+, but they can be used for any setting of multiple documents.

Getting started

  • Install python3 requirements pip install -r requirements.txt

Extract mentions and raw text from ECB+

Run the following script in order to extract the data from ECB+ dataset and build the gold conll files. The ECB+ corpus can be downloaded here.

python get_ecb_data.py --data_path path_to_data

Training Instructions

The core of our model is the pairwise scorer between two spans, which indicates how likely two spans belong to the same cluster.

Training method

We present 3 ways to train this pairwise scorer:

  1. Pipeline: first train a span scorer, then train the pairwise scorer using the same spans at each epoch.
  2. Continue: pre-train the span scorer, then train the pairwise scorer while keep training the span scorer.
  3. End-to-end: train together both models from scratch.

In order to choose the training method, you need to set the value of the training_method in the config_pairwise.json to pipeline, continue or e2e. In our paper, we found the continue method to perform the best for event coreference and we apply it for entity and ALL as well.

What are the labels ?

In ECB+, the entity and event coreference clusters are annotated separately, making it possible to train a model only on event or entity coreference. Therefore, our model also allows to be trained on events, entity, or both. You need to set the value of the mention_type in the config_pairwise.json (and config_span_scorer.json) to events, entities or mixed (corresponding to ALL in the paper).

Running the model

In both pipeline and continue methods, you need to first run the span scorer model

python train_span_scorer --config configs/config_span_scorer.json

For the pairwise scorer, run the following script

python train_pairwise_scorer --config configs/config_pairwise.json

Some important parameters in config_pairwise.json:

  • max_mention_span
  • top_k: pruning coefficient
  • training_method: (pipeline, continue, e2e)
  • subtopic: (true, false) whether to train at the topic or subtopic level (ECB+ notions).

Tuning threshold for agglomerative clustering

The training above will save 10 models (one for each epoch) in the specified directory, while each model is composed of a span_repr, a span scorer and a pairwise scorer. In order to find the best model and the best threshold for the agglomerative clustering, you need to do an hyperparameter search on the 10 models + several values for threshold, evaluated on the dev set. To do that, please set the config_clustering.json (split: dev) and run the two following scripts:

python tuned_threshold.py --config configs/config_clustering.json

python run_scorer.py [path_of_directory_of_conll_files] [mention_type]

Prediction

Given the trained pairwise scorer, the best model_num and the threshold from the above training and tuning, set the config_clustering.json (split: test) and run the following script.

python predict.py --config configs/config_clustering

(model_path corresponds to the directory in which you've stored the trained models)

An important configuration in the config_clustering is the topic_level. If you set false , you need to provide the path to the predicted topics in predicted_topics_path to produce conll files at the corpus level.

Evaluation

The output of the predict.py script is a file in the standard conll format. Then, it's straightforward to evaluate it with its corresponding gold conll file (created in the first step), using the official conll coreference scorer that you can find here or the coval system (python implementation).

Make sure to use the gold files of the same evaluation level (topic or corpus) as the predictions.

Notes

  • If you chose to train the pairwise with the end-to-end method, you don't need to provide a span_repr_path or a span_scorer_path in the config_pairwise.json.

  • If you use this model with gold mentions, the span scorer is not relevant, you should ignore the training method.

  • If you're interested in a newer but heavier model, check out our cross-encoder model

Team

Owner
Arie Cattan
PhD candidate, Computer Science, Bar-Ilan University
Arie Cattan
Addon and nodes for working with structural biology and molecular data in Blender.

Molecular Nodes 🧬 🔬 💻 Buy Me a Coffee to Keep Development Going! Join a Community of Blender SciVis People! What is Molecular Nodes? Molecular Node

Brady Johnston 456 Jan 08, 2023
An exploration of log domain "alternative floating point" for hardware ML/AI accelerators.

This repository contains the SystemVerilog RTL, C++, HLS (Intel FPGA OpenCL to wrap RTL code) and Python needed to reproduce the numerical results in

Facebook Research 373 Dec 31, 2022
Deep Multi-Magnification Network for multi-class tissue segmentation of whole slide images

Deep Multi-Magnification Network This repository provides training and inference codes for Deep Multi-Magnification Network published here. Deep Multi

Computational Pathology 12 Aug 06, 2022
Prototypical Pseudo Label Denoising and Target Structure Learning for Domain Adaptive Semantic Segmentation (CVPR 2021)

Prototypical Pseudo Label Denoising and Target Structure Learning for Domain Adaptive Semantic Segmentation (CVPR 2021, official Pytorch implementatio

Microsoft 247 Dec 25, 2022
Anchor-free Oriented Proposal Generator for Object Detection

Anchor-free Oriented Proposal Generator for Object Detection Gong Cheng, Jiabao Wang, Ke Li, Xingxing Xie, Chunbo Lang, Yanqing Yao, Junwei Han, Intro

jbwang1997 56 Nov 15, 2022
Node-level Graph Regression with Deep Gaussian Process Models

Node-level Graph Regression with Deep Gaussian Process Models Prerequests our implementation is mainly based on tensorflow 1.x and gpflow 1.x: python

1 Jan 16, 2022
This project provides the proof of the uniqueness of the equilibrium and the global asymptotic stability.

Delayed-cellular-neural-network This project provides the proof of the uniqueness of the equilibrium and the global asymptotic stability. There is als

4 Apr 28, 2022
Resources for the Ki testnet challenge

Ki Testnet Challenge This repository hosts ki-testnet-challenge. A set of scripts and resources to be used for the Ki Testnet Challenge What is the te

Ki Foundation 23 Aug 08, 2022
A Transformer-Based Siamese Network for Change Detection

ChangeFormer: A Transformer-Based Siamese Network for Change Detection (Under review at IGARSS-2022) Wele Gedara Chaminda Bandara, Vishal M. Patel Her

Wele Gedara Chaminda Bandara 214 Dec 29, 2022
Contains code for Deep Kernelized Dense Geometric Matching

DKM - Deep Kernelized Dense Geometric Matching Contains code for Deep Kernelized Dense Geometric Matching We provide pretrained models and code for ev

Johan Edstedt 83 Dec 23, 2022
DALL-Eval: Probing the Reasoning Skills and Social Biases of Text-to-Image Generative Transformers

DALL-Eval: Probing the Reasoning Skills and Social Biases of Text-to-Image Generative Transformers Authors: Jaemin Cho, Abhay Zala, and Mohit Bansal (

Jaemin Cho 98 Dec 15, 2022
An implementation demo of the ICLR 2021 paper Neural Attention Distillation: Erasing Backdoor Triggers from Deep Neural Networks in PyTorch.

Neural Attention Distillation This is an implementation demo of the ICLR 2021 paper Neural Attention Distillation: Erasing Backdoor Triggers from Deep

Yige-Li 84 Jan 04, 2023
Official PyTorch Implementation of SSMix (Findings of ACL 2021)

SSMix: Saliency-based Span Mixup for Text Classification (Findings of ACL 2021) Official PyTorch Implementation of SSMix | Paper Abstract Data augment

Clova AI Research 52 Dec 27, 2022
a dnn ai project to classify which food people are eating on audio recordings

Deep Learning - EAT Challenge About This project is part of an AI challenge of the DeepLearning course 2021 at the University of Augsburg. The objecti

Marco Tröster 1 Oct 24, 2021
ObjectDrawer-ToolBox: a graphical image annotation tool to generate ground plane masks for a 3D object reconstruction system

ObjectDrawer-ToolBox is a graphical image annotation tool to generate ground plane masks for a 3D object reconstruction system, Object Drawer.

77 Jan 05, 2023
ThunderSVM: A Fast SVM Library on GPUs and CPUs

What's new We have recently released ThunderGBM, a fast GBDT and Random Forest library on GPUs. add scikit-learn interface, see here Overview The miss

Xtra Computing Group 1.4k Dec 22, 2022
A stable algorithm for GAN training

DRAGAN (Deep Regret Analytic Generative Adversarial Networks) Link to our paper - https://arxiv.org/abs/1705.07215 Pytorch implementation (thanks!) -

195 Oct 10, 2022
Code for the paper "Regularizing Variational Autoencoder with Diversity and Uncertainty Awareness"

DU-VAE This is the pytorch implementation of the paper "Regularizing Variational Autoencoder with Diversity and Uncertainty Awareness" Acknowledgement

Dazhong Shen 4 Oct 19, 2022
A High-Quality Real Time Upscaler for Anime Video

Anime4K Anime4K is a set of open-source, high-quality real-time anime upscaling/denoising algorithms that can be implemented in any programming langua

15.7k Jan 06, 2023
Deploy optimized transformer based models on Nvidia Triton server

🤗 Hugging Face Transformer submillisecond inference 🤯 and deployment on Nvidia Triton server Yes, you can perfom inference with transformer based mo

Lefebvre Sarrut Services 1.2k Jan 05, 2023