Linking data between GBIF, Biodiverse, and Open Tree of Life

Last update: Oct 03, 2022

Overview

GBIF-biodiverse-OpenTree

Linking data between GBIF, Biodiverse, and Open Tree of Life

The python scripts will rely on opentree and Dendropy. To set up a virtual environment and install them run:

virtualenv -p python3 venv-gbot
source venv-gbot/bin/activate
pip install -r requirements.txt

Once that is set up - you can reactivate using any time you want to run analyses

source venv-gbot/bin/activate

To get an induced subtree from synth for a set of opentree ids:

python scripts/induced_synth_subtree_from_csv.py -q tests/query.csv

Owner

GitHub Repository

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Linking data between GBIF, Biodiverse, and Open Tree of Life

Related tags

Overview

GBIF-biodiverse-OpenTree

Owner

Neural network models for joint POS tagging and dependency parsing (CoNLL 2017-2018)

Tool which allow you to detect and translate text.

The ibet-Prime security token management system for ibet network.

PyTorch Language Model for 1-Billion Word (LM1B / GBW) Dataset

Google AI 2018 BERT pytorch implementation

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A Python script which randomly chooses and prints a file from a directory.

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Text to speech converter with GUI made in Python.

The projects lets you extract glossary words and their definitions from a given piece of text automatically using NLP techniques

PyTorch Implementation of "Bridging Pre-trained Language Models and Hand-crafted Features for Unsupervised POS Tagging" (Findings of ACL 2022)

Code for EMNLP20 paper: "ProphetNet: Predicting Future N-gram for Sequence-to-Sequence Pre-training"

A Flask Sentiment Analysis API, with visual implementation

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Lattice methods in TensorFlow

A demo for end-to-end English and Chinese text spotting using ABCNet.

SimCTG - A Contrastive Framework for Neural Text Generation

Few-shot Natural Language Generation for Task-Oriented Dialog

SentimentArcs: a large ensemble of dozens of sentiment analysis models to analyze emotion in text over time