Automated bug/error reporting for napari

Overview

napari-error-monitor

License PyPI Python Version CI codecov

Want to help out napari? Install this plugin!

This plugin will automatically send error reports to napari (via sentry.io) whenever an exception occurs while you are using napari.

The first time you run napari after installing this plugin an opt-in notification will appear (Be sure to click "yes", otherwise no reports will be collected or sent). You may opt back out at any time in napari's help menu.

Every effort is made to strip these reports of personally identifiable information. Here is an example exception event:

Example bug report
{
    'breadcrumbs': {
        'values': [
            {
                'category': 'subprocess',
                'data': {},
                'message': 'sw_vers -productVersion',
                'timestamp': '2022-02-02T01:30:00.216738Z',
                'type': 'subprocess'
            }
        ]
    },
    'contexts': {
        'runtime': {
            'build': '3.9.9 | packaged by conda-forge | (main, Dec 20 2021, 02:41:37) \n[Clang 11.1.0 ]',
            'name': 'CPython',
            'version': '3.9.9'
        }
    },
    'environment': 'macOS-10.15.7-x86_64-i386-64bit',
    'event_id': '02dd8ddd3a4b4743af3d7d7a09949df4',
    'exception': {
        'values': [
            {
                'mechanism': None,
                'module': None,
                'stacktrace': {
                    'frames': [
                        {
                            'context_line': '                x = 1 / 0',
                            'filename': 'napari_error_monitor/_util.py',
                            'function': 'get_sample_event',
                            'in_app': True,
                            'lineno': 130,
                            'module': 'napari_error_monitor._util',
                            'post_context': [
                                '            except Exception:',
                                '                with sentry_sdk.push_scope() as scope:',
                                '                    for k, v in _get_tags().items():',
                                '                        scope.set_tag(k, v)',
                                '                    del v, k, scope'
                            ],
                            'pre_context': [
                                "            # remove locals that wouldn't really be there",
                                '            del settings, _trans, kwargs, client, EVENT',
                                '            try:',
                                '                some_variable = 1',
                                '                another_variable = "my_string"'
                            ]
                        }
                    ]
                },
                'type': 'ZeroDivisionError',
                'value': 'division by zero'
            }
        ]
    },
    'extra': {'sys.argv': ['napari']},
    'level': 'error',
    'modules': {
        'aicsimageio': '4.5.2',
        'aicspylibczi': '3.0.4',
        'aiohttp': '3.8.1',
        'aiosignal': '1.2.0',
        'alabaster': '0.7.12',
        'anyio': '3.5.0',
        'appdirs': '1.4.4',
        'appnope': '0.1.2',
        'argon2-cffi': '21.3.0',
        'argon2-cffi-bindings': '21.2.0',
        'arrow': '1.2.1',
        'asciitree': '0.3.3',
        'asttokens': '2.0.5',
        'async-timeout': '4.0.2',
        'atomium': '1.0.11',
        'attrs': '21.4.0',
        'autopep8': '1.6.0',
        'babel': '2.9.1',
        'backcall': '0.2.0',
        'bcrypt': '3.2.0',
        'beautifulsoup4': '4.10.0',
        'binaryornot': '0.4.4',
        'black': '20.8b1',
        'bleach': '4.1.0',
        'bracex': '2.2.1',
        'build': '0.7.0',
        'cachey': '0.2.1',
        'cellpose': '0.6.5',
        'certifi': '2021.10.8',
        'cffi': '1.15.0',
        'cfgv': '3.3.1',
        'chardet': '4.0.0',
        'charset-normalizer': '2.0.10',
        'check-manifest': '0.47',
        'click': '7.1.2',
        'click-option-group': '0.5.3',
        'cloudpickle': '2.0.0',
        'colorama': '0.4.4',
        'commonmark': '0.9.1',
        'cookiecutter': '1.7.3',
        'coverage': '6.2',
        'cryptography': '36.0.1',
        'cycler': '0.11.0',
        'dask': '2022.1.0',
        'debugpy': '1.5.1',
        'decorator': '5.1.1',
        'defusedxml': '0.7.1',
        'distlib': '0.3.4',
        'dnspython': '2.2.0',
        'docstring-parser': '0.13',
        'docutils': '0.16',
        'elementpath': '2.4.0',
        'email-validator': '1.1.3',
        'entrypoints': '0.3',
        'executing': '0.8.2',
        'fancycompleter': '0.9.1',
        'fasteners': '0.17.2',
        'fastremap': '1.12.2',
        'filelock': '3.4.2',
        'flake8': '3.8.4',
        'fonttools': '4.28.5',
        'freetype-py': '2.2.0',
        'frozenlist': '1.3.0',
        'fsspec': '2022.1.0',
        'furo': '2022.1.2',
        'gitdb': '4.0.9',
        'gitpython': '3.1.26',
        'greenlet': '1.1.2',
        'heapdict': '1.0.1',
        'hsluv': '5.0.2',
        'hypothesis': '6.35.1',
        'identify': '2.4.4',
        'idna': '3.3',
        'imagecodecs': '2021.11.20',
        'imageio': '2.10.5',
        'imageio-ffmpeg': '0.4.5',
        'imagesize': '1.3.0',
        'importlib-metadata': '4.10.1',
        'iniconfig': '1.1.1',
        'install': '1.3.5',
        'intervaltree': '3.1.0',
        'ipykernel': '6.7.0',
        'ipython': '8.0.0',
        'ipython-genutils': '0.2.0',
        'ipywidgets': '7.6.5',
        'jedi': '0.18.1',
        'jinja2': '3.0.3',
        'jinja2-time': '0.2.0',
        'jsonschema': '3.2.0',
        'jupyter': '1.0.0',
        'jupyter-book': '0.12.1',
        'jupyter-cache': '0.4.3',
        'jupyter-client': '7.1.1',
        'jupyter-console': '6.4.0',
        'jupyter-core': '4.9.1',
        'jupyter-server': '1.13.3',
        'jupyter-server-mathjax': '0.2.3',
        'jupyter-sphinx': '0.3.2',
        'jupyterlab-pygments': '0.1.2',
        'jupyterlab-widgets': '1.0.2',
        'jupytext': '1.11.5',
        'kiwisolver': '1.3.2',
        'latexcodec': '2.0.1',
        'linkify-it-py': '1.0.3',
        'llvmlite': '0.38.0',
        'locket': '0.2.1',
        'loguru': '0.5.3',
        'lxml': '4.7.1',
        'magicgui': '0.3.5.dev18+g78d1687',
        'markdown-it-py': '1.1.0',
        'markupsafe': '2.0.1',
        'matplotlib': '3.5.1',
        'matplotlib-inline': '0.1.3',
        'mccabe': '0.6.1',
        'mdit-py-plugins': '0.2.8',
        'meshzoo': '0.9.2',
        'mistune': '0.8.4',
        'mrc': '0.2.0',
        'msgpack': '1.0.3',
        'multidict': '5.2.0',
        'mypy': '0.931',
        'mypy-extensions': '0.4.3',
        'myst-nb': '0.13.1',
        'myst-parser': '0.15.2',
        'napari': '0.4.14rc1.dev4+gcdf58d44b',
        'napari-aicsimageio': '0.4.1',
        'napari-console': '0.0.4',
        'napari-dv': '0.2.7.dev0+g54e1691.d20220128',
        'napari-error-monitor': '0.1.dev1+g1b388f2.d20220201',
        'napari-hello': '0.0.1',
        'napari-math': '0.0.1a0',
        'napari-micromanager': '0.0.1rc6.dev14+g5149788.d20220128',
        'napari-molecule-reader': '0.1.2.dev1+gc2ec2de',
        'napari-plugin-engine': '0.2.0',
        'napari-pyclesperanto-assistant': '0.12.0',
        'napari-skimage-regionprops': '0.2.9',
        'napari-svg': '0.1.6',
        'napari-time-slicer': '0.4.2',
        'napari-workflows': '0.1.2',
        'natsort': '8.0.2',
        'nbclient': '0.5.10',
        'nbconvert': '6.4.0',
        'nbdime': '3.1.1',
        'nbformat': '5.1.3',
        'nd2': '0.1.4',
        'nest-asyncio': '1.5.4',
        'networkx': '2.6.3',
        'nodeenv': '1.6.0',
        'notebook': '6.4.7',
        'npe2': '0.1.1',
        'numba': '0.55.0',
        'numcodecs': '0.9.1',
        'numpy': '1.20.3',
        'numpydoc': '1.1.0',
        'ome-types': '0.2.10',
        'opencv-python-headless': '4.5.5.62',
        'packaging': '21.3',
        'pandas': '1.3.5',
        'pandocfilters': '1.5.0',
        'paramiko': '2.9.2',
        'parso': '0.8.3',
        'partd': '1.2.0',
        'pathspec': '0.9.0',
        'pdbpp': '0.10.3',
        'peewee': '3.14.8',
        'pep517': '0.12.0',
        'pexpect': '4.8.0',
        'pickleshare': '0.7.5',
        'pillow': '8.4.0',
        'pint': '0.18',
        'pip': '21.3.1',
        'platformdirs': '2.4.1',
        'pluggy': '1.0.0',
        'pooch': '1.5.2',
        'poyo': '0.5.0',
        'pre-commit': '2.16.0',
        'prometheus-client': '0.12.0',
        'prompt-toolkit': '3.0.24',
        'psutil': '5.9.0',
        'psygnal': '0.2.0',
        'ptyprocess': '0.7.0',
        'pure-eval': '0.2.1',
        'py': '1.11.0',
        'pybtex': '0.24.0',
        'pybtex-docutils': '1.0.1',
        'pyclesperanto-prototype': '0.12.0',
        'pycodestyle': '2.8.0',
        'pycparser': '2.21',
        'pydantic': '1.9.0',
        'pydata-sphinx-theme': '0.7.2',
        'pyflakes': '2.2.0',
        'pygments': '2.11.2',
        'pymmcore': '10.1.1.70.5',
        'pymmcore-plus': '0.1.8',
        'pynacl': '1.5.0',
        'pyopencl': '2021.2.13',
        'pyopengl': '3.1.5',
        'pyparsing': '3.0.6',
        'pyperclip': '1.8.2',
        'pyrepl': '0.9.0',
        'pyro5': '5.13.1',
        'pyrsistent': '0.18.1',
        'pyside2': '5.15.2.1',
        'pytest': '6.2.5',
        'pytest-cookies': '0.6.1',
        'pytest-cov': '3.0.0',
        'pytest-faulthandler': '2.0.1',
        'pytest-order': '1.0.1',
        'pytest-qt': '4.0.2',
        'python-dateutil': '2.8.2',
        'python-dotenv': '0.19.2',
        'python-slugify': '5.0.2',
        'pytomlpp': '1.0.10',
        'pytools': '2021.2.9',
        'pytz': '2021.3',
        'pywavelets': '1.2.0',
        'pyyaml': '6.0',
        'pyzmq': '22.3.0',
        'qtconsole': '5.2.2',
        'qtpy': '2.0.0',
        'regex': '2021.11.10',
        'requests': '2.27.1',
        'rich': '11.0.0',
        'rmsd': '1.4',
        'ruamel.yaml': '0.17.20',
        'ruamel.yaml.clib': '0.2.6',
        'scikit-image': '0.19.1',
        'scipy': '1.7.3',
        'semgrep': '0.78.0',
        'send2trash': '1.8.0',
        'sentry-sdk': '1.5.4',
        'serpent': '1.40',
        'setuptools': '60.5.0',
        'shiboken2': '5.15.2.1',
        'six': '1.16.0',
        'smmap': '5.0.0',
        'sniffio': '1.2.0',
        'snowballstemmer': '2.2.0',
        'sortedcontainers': '2.4.0',
        'soupsieve': '2.3.1',
        'sourcery-cli': '0.10.0',
        'sphinx': '4.4.0',
        'sphinx-autodoc-typehints': '1.12.0',
        'sphinx-book-theme': '0.1.10',
        'sphinx-comments': '0.0.3',
        'sphinx-copybutton': '0.4.0',
        'sphinx-external-toc': '0.2.3',
        'sphinx-jupyterbook-latex': '0.4.6',
        'sphinx-multitoc-numbering': '0.1.3',
        'sphinx-panels': '0.6.0',
        'sphinx-tabs': '3.2.0',
        'sphinx-thebe': '0.0.10',
        'sphinx-togglebutton': '0.2.3',
        'sphinxcontrib-applehelp': '1.0.2',
        'sphinxcontrib-bibtex': '2.2.1',
        'sphinxcontrib-devhelp': '1.0.2',
        'sphinxcontrib-htmlhelp': '2.0.0',
        'sphinxcontrib-jsmath': '1.0.1',
        'sphinxcontrib-qthelp': '1.0.3',
        'sphinxcontrib-serializinghtml': '1.1.5',
        'sqlalchemy': '1.4.29',
        'stack-data': '0.1.4',
        'superqt': '0.2.5.post2.dev7+ga49bcd7',
        'tensorstore': '0.1.16',
        'terminado': '0.12.1',
        'testpath': '0.5.0',
        'text-unidecode': '1.3',
        'tifffile': '2021.11.2',
        'toml': '0.10.2',
        'tomli': '2.0.0',
        'toolz': '0.11.2',
        'torch': '1.10.1',
        'tornado': '6.1',
        'tox': '3.24.5',
        'tox-conda': '0.9.1',
        'tqdm': '4.62.3',
        'traitlets': '5.1.1',
        'transforms3d': '0.3.1',
        'transitions': '0.8.10',
        'typed-ast': '1.5.1',
        'typer': '0.4.0',
        'typing-extensions': '4.0.1',
        'uc-micro-py': '1.0.1',
        'urllib3': '1.26.8',
        'useq-schema': '0.1.1.dev13+g01d1b46.d20220120',
        'valerius': '0.2.0',
        'virtualenv': '20.13.0',
        'vispy': '0.9.4',
        'watchdog': '2.1.6',
        'wcmatch': '8.3',
        'wcwidth': '0.2.5',
        'webencodings': '0.5.1',
        'websocket-client': '1.2.3',
        'wheel': '0.37.1',
        'widgetsnbextension': '3.5.2',
        'wmctrl': '0.4',
        'wrapt': '1.13.3',
        'wurlitzer': '3.0.2',
        'xarray': '0.20.2',
        'xmlschema': '1.9.2',
        'yarl': '1.7.2',
        'zarr': '2.10.3',
        'zipp': '3.7.0'
    },
    'platform': 'python',
    'release': '0.4.14rc1.dev4+gcdf58d44b',
    'sdk': {
        'integrations': [
            'aiohttp',
            'argv',
            'atexit',
            'dedupe',
            'excepthook',
            'logging',
            'modules',
            'sqlalchemy',
            'stdlib',
            'threading',
            'tornado'
        ],
        'name': 'sentry.python',
        'packages': [{'name': 'pypi:sentry-sdk', 'version': '1.5.4'}],
        'version': '1.5.4'
    },
    'server_name': '',
    'tags': {
        'platform.name': 'MacOS 10.15.7',
        'platform.system': 'Darwin',
        'qtpy.API_NAME': 'PySide2',
        'qtpy.QT_VERSION': '5.15.2'
    },
    'timestamp': '2022-02-02T01:30:00.229122Z'
}

note: in the opt-in dialog, there is a checkbox labeled "include local variables", checking this will include the value of variables in the local scope when an exception occurs. While these can be very useful when interpreting a bug report, they may occasionally include local file path strings. If that concerns you, please leave this box unchecked

Install

pip install napari-error-monitor

Thank you!!

Owner
Talley Lambert
Microscopist at Harvard Medical School
Talley Lambert
Auto-detecting the n+1 queries problem in Python

nplusone nplusone is a library for detecting the n+1 queries problem in Python ORMs, including SQLAlchemy, Peewee, and the Django ORM. The Problem Man

Joshua Carp 837 Dec 29, 2022
Never use print for debugging again

PySnooper - Never use print for debugging again PySnooper is a poor man's debugger. If you've used Bash, it's like set -x for Python, except it's fanc

Ram Rachum 15.5k Jan 01, 2023
Middleware that Prints the number of DB queries to the runserver console.

Django Querycount Inspired by this post by David Szotten, this project gives you a middleware that prints DB query counts in Django's runserver consol

Brad Montgomery 332 Dec 23, 2022
Trace any Python program, anywhere!

lptrace lptrace is strace for Python programs. It lets you see in real-time what functions a Python program is running. It's particularly useful to de

Karim Hamidou 687 Nov 20, 2022
Debugger capable of attaching to and injecting code into python processes.

DISCLAIMER: This is not an official google project, this is just something I wrote while at Google. Pyringe What this is Pyringe is a python debugger

Google 1.6k Dec 15, 2022
Visual profiler for Python

vprof vprof is a Python package providing rich and interactive visualizations for various Python program characteristics such as running time and memo

Nick Volynets 3.9k Jan 01, 2023
一个小脚本,用于trace so中native函数的调用。

trace_natives 一个IDA小脚本,获取SO代码段中所有函数的偏移地址,再使用frida-trace 批量trace so函数的调用。 使用方法 1.将traceNatives.py丢进IDA plugins目录中 2.IDA中,Edit-Plugins-traceNatives IDA输

296 Dec 28, 2022
A configurable set of panels that display various debug information about the current request/response.

Django Debug Toolbar The Django Debug Toolbar is a configurable set of panels that display various debug information about the current request/respons

Jazzband 7.3k Dec 29, 2022
The official code of LM-Debugger, an interactive tool for inspection and intervention in transformer-based language models.

LM-Debugger is an open-source interactive tool for inspection and intervention in transformer-based language models. This repository includes the code

Mor Geva 110 Dec 28, 2022
Python's missing debug print command and other development tools.

python devtools Python's missing debug print command and other development tools. For more information, see documentation. Install Just pip install de

Samuel Colvin 637 Jan 02, 2023
Sweeter debugging and benchmarking Python programs.

Do you ever use print() or log() to debug your code? If so, ycecream, or y for short, will make printing debug information a lot sweeter. And on top o

42 Dec 12, 2022
🍦 Never use print() to debug again.

IceCream -- Never use print() to debug again Do you ever use print() or log() to debug your code? Of course you do. IceCream, or ic for short, makes p

Ansgar Grunseid 6.5k Jan 07, 2023
Little helper to run Steam apps under Proton with a GDB debugger

protongdb A small little helper for running games with Proton and debugging with GDB Requirements At least Python 3.5 protontricks pip package and its

Joshie 21 Nov 27, 2022
A simple rubber duck debugger

Rubber Duck Debugger I found myself many times asking a question on StackOverflow or to one of my colleagues just for finding the solution simply by d

1 Nov 10, 2021
Winpdb Reborn - A GPL Python Debugger, reborn from the unmaintained Winpdb

Note from Philippe Fremy The port of winpdb-reborn to Python 3 / WxPython 4 is unfortunately not working very well. So Winpdb for Python 3 does not re

Philippe F 84 Dec 22, 2022
AryaBota: An app to teach Python coding via gradual programming and visual output

AryaBota An app to teach Python coding, that gradually allows students to transition from using commands similar to natural language, to more Pythonic

5 Feb 08, 2022
OpenCodeBlocks an open-source tool for modular visual programing in python

OpenCodeBlocks OpenCodeBlocks is an open-source tool for modular visual programing in python ! Although for now the tool is in Beta and features are c

Mathïs Fédérico 1.1k Jan 06, 2023
Pyinstrument - a Python profiler. A profiler is a tool to help you optimize your code - make it faster.

Pyinstrument🚴 Call stack profiler for Python. Shows you why your code is slow!

Joe Rickerby 5k Jan 08, 2023
Hdbg - Historical Debugger

hdbg - Historical Debugger This is in no way a finished product. Do not use this

Fivreld 2 Jan 02, 2022
Graphical Python debugger which lets you easily view the values of all evaluated expressions

birdseye birdseye is a Python debugger which records the values of expressions in a function call and lets you easily view them after the function exi

Alex Hall 1.5k Dec 24, 2022