Python script to combine the statistical results of a TOPAS simulation that was split up into multiple batches.

Last update: Aug 16, 2022

Overview

topas-merge-simulations

Python script to combine the statistical results of a TOPAS simulation that was split up into multiple batches

At the top of the script, specify:

the name of the output file
the input files in a list
the number of histories used for each file (in order)

Assumes a ".csv" input file format from a TOPAS Scorer with the following header format:

# TOPAS Version: {...}
# Parameter File: {...}.txt
# Results for scorer {...}
# Scored in component: {...}
# X in {...} bin of {...} cm
# Y in 1 {...} of {...} cm
# Z in {...} bins of {...} cm
# DoseToMedium ( Gy ) : {Sum/Mean} Standard_Deviation
Voxel Coordinate X, Voxel Coordinate Y, Voxel Coordinate Z, {Sum/Mean} Value, Standard_Deviation Value
.
.
.

Works using Python3, but written without any external dependencies.

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Releases(v1.0.0)

v1.0.0(Dec 20, 2021)

Functional script with bare minimum functionality
Source code(tar.gz)
Source code(zip)

Owner

Sebastian Schäfer

Master Student of medical physics and Python enthusiast.

GitHub Repository

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Python script to combine the statistical results of a TOPAS simulation that was split up into multiple batches.

Related tags

Overview

topas-merge-simulations

Python script to combine the statistical results of a TOPAS simulation that was split up into multiple batches

At the top of the script, specify:

Assumes a ".csv" input file format from a TOPAS Scorer with the following header format:

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