Random Forest Classification for Neural Subtypes

This notebook is focussed on stepping through a Random Forest classifier for neural subtypes extracted from extracellular recordings from human brain organoids. We will step through multi-demsionality reduction, clustering, waveform plotting and confusion matrices. Notably, this is a simple data analysis notebook for the purpose of a Medium & Kaggle contribution.

• Kaggel: https://www.kaggle.com/michaelzabolocki/random-forest-classification-for-neurons/notebook
• Medium: https://medium.com/@mzabolocki/building-a-random-forest-classifier-for-neural-spike-data-8e523f3639e1
• Dataset: https://www.kaggle.com/joseguzman/waveforms

Waveform plotting

Multi-dimensionality reduction

Clustering

Data breakdown

Random forest