Make GIFs from time-stacked xarray.DataArrays (time, [optional band], y, x), dead-simple.

Last update: Dec 22, 2022

Related tags

Overview

GeoGIF

Make GIFs from time-stacked xarray.DataArrays (time, [optional band], y, x), dead-simple.

from geogif import gif, dgif
gif(data_array)
dgif(dask_data_array).compute()

The "geo" part is a lie, actually. The arrays don't have to be geospatial in nature. But I called it GeoGIF because:

Wanting to animate a time-stack of imagery (like you'd get from stackstac) is a common task in the earth-observation/geospatial world.
I think GeoGIF is a hilarious idea¹.

1: To ruin the joke, it sounds like GeoTIFF, a ubiquitous geospatial image format. If you also think this is a funny idea, and believe you'd have a better use for the name than I do, I'd happily cede it to you.

Installation

pip install geogif

Documentation

See https://geogif.readthedocs.io/en/latest/.

Development

GeoGIF is managed by Poetry, so be sure that's installed first. To develop locally, first fork or clone the repo. Then, to set up a virtual environment and install the necessary dependencies:

cd geogif
poetry install -E tests -E docs

Running Tests

GeoGIF has some basic end-to-end tests, written with Hypothesis. To run:

pytest

This will take ~30 seconds (longer the first time), as Hypothesis generates fake data to root out possible errors.

Code style

GeoGIF is formatted with shed, in order to allow for as few opinions as possible.

Comments

Bump pillow from 9.0.0 to 9.0.1
Bumps pillow from 9.0.0 to 9.0.1.

Release notes

Sourced from pillow's releases.

9.0.1

https://pillow.readthedocs.io/en/stable/releasenotes/9.0.1.html

Changes

In show_file, use os.remove to remove temporary images. CVE-2022-24303 #6010 [@radarhere, @hugovk]

Restrict builtins within lambdas for ImageMath.eval. CVE-2022-22817 #6009 [radarhere]

Changelog

Sourced from pillow's changelog.

9.0.1 (2022-02-03)

In show_file, use os.remove to remove temporary images. CVE-2022-24303 #6010 [radarhere, hugovk]

Restrict builtins within lambdas for ImageMath.eval. CVE-2022-22817 #6009 [radarhere]

Commits

6deac9e 9.0.1 version bump

c04d812 Update CHANGES.rst [ci skip]

4fabec3 Added release notes for 9.0.1

02affaa Added delay after opening image with xdg-open

ca0b585 Updated formatting

427221e In show_file, use os.remove to remove temporary images

c930be0 Restrict builtins within lambdas for ImageMath.eval

75b69dd Dont need to pin for GHA

cd938a7 Autolink CWE numbers with sphinx-issues

2e9c461 Add CVE IDs

See full diff in compare view

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.

Dependabot commands and options

You can trigger Dependabot actions by commenting on this PR:

@dependabot rebase will rebase this PR

@dependabot recreate will recreate this PR, overwriting any edits that have been made to it

@dependabot merge will merge this PR after your CI passes on it

@dependabot squash and merge will squash and merge this PR after your CI passes on it

@dependabot cancel merge will cancel a previously requested merge and block automerging

@dependabot reopen will reopen this PR if it is closed

@dependabot close will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually

@dependabot ignore this major version will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself)

@dependabot ignore this minor version will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself)

@dependabot ignore this dependency will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself)

@dependabot use these labels will set the current labels as the default for future PRs for this repo and language

@dependabot use these reviewers will set the current reviewers as the default for future PRs for this repo and language

@dependabot use these assignees will set the current assignees as the default for future PRs for this repo and language

@dependabot use this milestone will set the current milestone as the default for future PRs for this repo and language

You can disable automated security fix PRs for this repo from the Security Alerts page.

dependencies
opened by dependabot[bot] 1
please remove python version limit

hi,

looks like great tool! I tried to install it using pip, but got error: ERROR: Package 'geogif-0.1.2' requires a different Python: 3.7.6 not in '>=3.8,<4.0'

could you please remove the strict dependency on python 3.7.6 ?

thank you

opened by espiritocz 1
Bump Pillow to 9.0, support 2022 Dask

Bump Pillow to 9.0 due to multiple vulnerabilities: https://github.com/advisories/GHSA-xrcv-f9gm-v42c, https://github.com/advisories/GHSA-8vj2-vxx3-667w, https://github.com/advisories/GHSA-pw3c-h7wp-cvhx

Closes #4

opened by gjoseph92 0
Support dask>=2022

Our dask dependency won't allow us to go beyond 2021: https://github.com/gjoseph92/stackstac/blob/b1172defb8dc30c8502316f73228a42428f76753/pyproject.toml#L18

Bump this and cut a release.

opened by gjoseph92 0
Loosen version restrictions

Necessary for https://github.com/gjoseph92/stackstac/issues/51. We have to do a crazy dance because of https://github.com/python-poetry/poetry/issues/697.

This lockfile is out of date. I've manually overridden pyproject.toml to an unsolveable state in order to bump the xarray version and cut a release. This will be resolved in a future commit.

opened by gjoseph92 0
CLI Execution

This is super slick! I love how quick and easy it is. Any interest in an install-able little executable we could just run from the CLI?

geogif ./my_data.nc:TMP_2M ./out.gif

Something like that?

opened by four43 2

Releases(v0.1.3)

v0.1.3(Mar 17, 2022)

Changelog: https://github.com/gjoseph92/geogif/blob/main/CHANGELOG.md#013-2022-03-16

Full Changelog: https://github.com/gjoseph92/geogif/compare/v0.1.2...v0.1.3
Source code(tar.gz)
Source code(zip)
v0.1.2(Jan 20, 2022)

Changelog: https://github.com/gjoseph92/geogif/blob/main/CHANGELOG.md#012-2022-01-20
Source code(tar.gz)
Source code(zip)

Owner

Gabe Joseph

GitHub Repository https://geogif.readthedocs.io/

Easy to use Python module to extract Exif metadata from digital image files.

719 Jan 05, 2023

Image2scan - a python program that can be applied on an image in order to get a scan of it back

image2scan Purpose image2scan is a python program that can be applied on an image in order to get a scan of it back. For this purpose, it searches for

2 Feb 13, 2022

Fixes 500+ mislabeled MURA images

In this repository, new csv files are provided that fixes 500+ mislabeled MURA x-rays for all categories. The mislabeled x-rays mainly had hardware in them. This project only fixes the false negative

4 May 18, 2022

Gallery written in Python to manage your photos

GalleryMan Gallery written in Python to manage your photos Installation

24 Dec 18, 2022

Napari simpleitk image processing

napari-simpleitk-image-processing (n-SimpleITK) Process images using SimpleITK in napari Usage Filters of this napari plugin can be found in the Tools

11 Dec 19, 2022

Using P5.js, Processing and Python to create generative art

Experiments in Generative Art Using Python, Processing, and P5.js Quick Links Daily Sketches March 2021. | Gallery | Repo | Done using P5.js Genuary 2

33 Jul 06, 2022

Panel Competition Image Generator

Panel Competition Image Generator This project was build by a member of the NFH community and is open for everyone who wants to try it. Relevant links

1 Oct 22, 2021

Multiparametric Image Analysis

Documentation The documentation is available on populse_mia's website here Installation From PyPI, for users By cloning the package, for developers Fr

9 Dec 14, 2022

Make your master artistic punk avatar through machine learning world famous paintings

Master-art-punk Make your master artistic punk avatar through machine learning world famous paintings. 通过机器学习世界名画制作属于你的大师级艺术朋克头像 Nowadays, NFT is beco

23 Jan 04, 2022

MikuMikuRig是一款集生成控制器，自动导入动画，自动布料为一体的blender插件

Miku_Miku_Rig MikuMikuRig是一款集生成控制器，自动导入动画，自动布料为一体的blender插件。 MikumiKurig is a Blender plugin that can generates rig, automatically imports animations

342 Dec 29, 2022

NFT collection generator. Generates layered images

NFT collection generator Generates layered images, whole collections. Provides additional functionality. Repository includes three scripts generate.py

10 Nov 15, 2022

Create QR Code for link using Python

Quick Response QR is short and named for a quick read from a cell phone. Used to view information from transitory media and put it on your cell phone.

1 Jan 09, 2022

Dynamic image server for web and print

Quru Image Server - dynamic imaging for web and print QIS is a high performance web server for creating and delivering dynamic images. It is ideal for

84 Jan 03, 2023

Python binding to Skia Graphics Library

Skia python binding Python binding to Skia Graphics Library. Binding based on pybind11. Currently, the binding is under active development. Install Bi

170 Jan 06, 2023

A minimal python script for generating bip39 seed phrases, and corresponding Seed Signer Seed seed phrase qr code ready for offline printing.

8 Sep 12, 2022

Make GIFs from time-stacked xarray.DataArrays (time, [optional band], y, x), dead-simple.

Related tags

Overview

GeoGIF

Installation

Documentation

Development

Running Tests

Code style

Comments

Bump pillow from 9.0.0 to 9.0.1

9.0.1

Changes

9.0.1 (2022-02-03)

please remove python version limit

Bump Pillow to 9.0, support 2022 Dask

Support dask>=2022

Loosen version restrictions

CLI Execution