An evolutionary multi-agent platform based on mesa and NEAT

Related tags

MiscellaneousEvoAgent
Overview

EvoAgent

An evolutionary multi-agent platform based on mesa and NEAT
A video of an old version of EvoAgent can be found on youtube:
https://www.youtube.com/watch?v=pOF1H84xPik&ab_channel=VBiscione

Overview

With this tool you can evolve agents in a simple 2D environments.
At the beginning, agents are endowed with a simple neural network which is specified by their genome. With time, they'll make children, which will inherit the genome, plus some random mutations. The mutations will add a connetion, a node, or change the weight. The evolutionary system is based on NEAT by Kenneth Stanley (paper here). However, the main difference between this approach and the classic evolutionary algorithm approach, is the naturalistic approach we are using here. In a classic evolutionary algorithm we would use a fitness function, we would test our agents, and we would use a genetic operator for generating the next generation. We have none of that here. Agents will spawn a new children every x time-steps. The more they survive, the more children they'll get. I found this approach much more intuitively valid as will simply respond to the rule: the more you survive, the more you'll spread your genes. This will also allow for generational interactions (as multiple generations will live at the same time), in case one wants to run experiments on family behaviour etc.

Install

git clone [email protected]:ValerioB88/EvoAgent.git

EvoAgent plots everything in the browser. This is heavily dependent on the Mesa library. My fork of Project Mesa should be automatically added as a submodule.

Examples

There are several examples in the folder code/evoagent/experiments/, which should get you started. Most of this is self explanatory. For example, run the file difficult_env.py and a browser with the environment view should open. Both the model state and the population gets saved (the model state includes the population). You want to use the model state to continue a running simulation with exactly the same parameters, from exactly the same point (the model state includes the population state). Instead, you may want to test an evolved population on a different enviornment: in that case, load the population. Examples of both these cases in continue_sim.py and load_pop.py. Model and population get saved every 1000 time steps, or when you press s.

Environment View

This contains a canvas, information about the selected agent, and some plots. At each points there always be a selected agents, for which many info are shown in the text field on the right sidebar. You can change the selected agent by pressing a and d on your keyboard (in a future version, it will be possible to click on the agent on the canvas to select it). Other info are shown in the following image:

Shortcuts

q start/stop simulation
a/d previous/next agent
k kill selected agent
c selected agent spawn a child
s save model
x advance the simulation one step

Agents Behaviour

Agents will have a limited field of view, specified by the parameters fov and max_vision_dist. You can visualize them by checking Render FOV in the environment view. Each agent will have a maximum lifespan of max_age = 500, but it can die faster if its energy goes to 0. They have a energy_depletion rate of 0.008. An agent will eat a food token when it touches it, getting an energy increase of 0.8 (or whathever established by the current Epoch, see later), up to 1. Agent will become fertile after fertile_age_start = 90 timesteps. At that point, they will spawn a child every time_between_children = 100 timesteps. For now, reproduction is asexual, so there is no crossover (this will be expanded in a next version).

Agents can only perceive the closest food token, IF it's within their field of view. If the selected agent is perceiving a food token, this will be represented with a red color in the environment view. Agents' network input will be the linear distance to the perceived food token, the angular distance, and their own energy level. There will be two output units, one defining the forward/backward movement, the other one defining the rotation.

Epochs

The epochs are interval of times defined by the amount of food in the environment.

epochs = deque([Epoch(2000, [0.8]*200),
                Epoch(2000, [0.8]*100),
                Epoch(6000, [0.8]*75)])

This means that we have 3 epochs, the first lasting 2000 iteration, the last 6000 iterations. The first will have 200 food tokens, each provigin 0.8 units of energy (recall that [0.8]*200 generates a list of 200 elements of value 0.8: [0.8, 0.8, 0.8....]. By changing the second parametr, you can specify the distribution of food token easily. You can also have "posionous" food: Epoch(2000, [-0.2]*200) this will work. However, currently the agents don't have a way to differentiate between "good" and "bad" food, so it doesn't make much sense to use bad food right now.

The simulation will activate one epoch at the time, starting from the first one. When the last epoch finishes, the simulation stop. You can instead run the simulation indefinitively by setting the epoch duration to np.inf.

Speed Up Simulation

In the environment view, uncheck Render Canvas, then set the Frame per Second slider to 0. That's as fast as it can get!

Known Problems

If you stop the simulation and try to run it again, you'll get the error:
OSError: [WinError 10048] Only one usage of each socket address (protocol/network address/port) is normally permitted
To fix this, try to change the port in server.launch(...). If it doesn't work, close and open your browser. I know this is annoying, but hadn't have the time to fix it yet.

This has only been tested on Windows 10 and Edge 97. I don't plan to test it on any other configuration. Sorry!

To Do

☐ Add sexual reproduction: find a partner, do crossover
☐ Many agents options should be in a config file
☐ Select an agent by clicking on it with the mouse
☐ Implement data collection - or adapt mesa data collection
☐ Implement more ways to perceive food
☐ Implement ways to perceive other agents
☐ Server port stays open after code stops - which often lead to annoying behaviour. Find a way to fix this

Owner
Valerio1988
Valerio1988
A python script that automatically joins a zoom meeting based on your timetable.

Zoom Automation A python script that automatically joins a zoom meeting based on your timetable. What does it do? It performs the following processes:

Shourya Gupta 3 Jan 01, 2022
Simple Python-based web application to allow UGM students to fill their QR presence list without having another device in hand.

Praesentia Praesentia is a simple Python-based web application to allow UGM students to fill their QR presence list without having another device in h

loncat 20 Sep 29, 2022
python based clash stars made by grade 7 and 5

clash_stars python based clash stars made by grade 7 and 5 How to play: PLAYER ONE (LEFT PLAYER) Move: W,A,S,D Shoot: SHIFT PLAYER TWO (RIGHT PLAYER)

5 Oct 22, 2021
DRF magic links

drf-magic-links Installation pip install drf-magic-links Add URL patterns # urls.py

Dmitry Kalinin 1 Nov 07, 2021
Built with Python programming language and QT library and Guess the number in three easy, medium and hard rolls

password-generator Built with Python programming language and QT library and Guess the number in three easy, medium and hard rolls Password generator

Amir Hussein Sharifnezhad 3 Oct 09, 2021
MDAnalysis tool to calculate membrane curvature.

The MDAkit for membrane curvature analysis is part of the Google Summer of Code program and it is linked to a Code of Conduct.

MDAnalysis 19 Oct 20, 2022
Plugin to manage site, circuit and device diagrams and documents in Netbox

Netbox Documents Plugin A plugin designed to faciliate the storage of site, circuit and device specific documents within NetBox Note: Netbox v3.2+ is

Jason Yates 38 Dec 24, 2022
Python script which synchronizes the replica-directoty with the original-one.

directories_synchronizer Python script which synchronizes the replica-directoty with the original-one. Automatically detects all changes when script i

0 Feb 13, 2022
Advanced Developing of Python Apps Final Exercise

Advanced-Developing-of-Python-Apps-Final-Exercise This is an exercise that I did for a python advanced learning course. The exercise is divided into t

Alejandro Méndez Fernández 1 Dec 04, 2021
Some Python scripts that fx(hash) users might find useful.

fx_hash_utils Some Python scripts that fx(hash) users might find useful. get_images This script downloads all the static images of the tokens generate

30 Oct 05, 2022
MODeflattener deobfuscates control flow flattened functions obfuscated by OLLVM using Miasm.

MODeflattener deobfuscates control flow flattened functions obfuscated by OLLVM using Miasm.

Suraj Malhotra 138 Jan 07, 2023
Cross-platform MachO/ObjC Static binary analysis tool & library. class-dump + otool + lipo + more

ktool Static Mach-O binary metadata analysis tool / information dumper pip3 install k2l Development is currently taking place on the @python3.10 branc

Kritanta 301 Dec 28, 2022
Appointment Tracker that allows user to input client information and update if needed.

Appointment-Tracker Appointment Tracker allows an assigned admin to input client information regarding their appointment and their appointment time. T

IS Coding @ KSU 1 Nov 30, 2021
A "multiclipboards" script for an efficient way to improve the original clipboards which are only able to save one string at a time

A "multiclipboards" script for an efficient way to improve the original clipboards which are only able to save one string at a time. Works on both Windows and Linux.

1 Jan 24, 2022
A wrapper around the python Tkinter library for customizable and modern ui-elements in Tkinter

CustomTkinter With CustomTkinter you can create modern looking user interfaces in python with tkinter. CustomTkinter is a tkinter extension which prov

4.9k Jan 02, 2023
Use `forge` and `cast` commands in Python scripts

foundrycli.py ( 🔥 , 🐍 ) foundrycli.py is a Python library I've made for personal use; now open source. It lets you access forge and cast CLIs from P

Zero Ekkusu 17 Jul 17, 2022
A web app that is written entirely in Python

University Project About I made this web app to finish a project assigned by my teacher. It is written entirely in Python, thanks to streamlit to make

15 Nov 27, 2022
Simple python code for compile brainfuck program.

py-brainf*ck Just a basic compiled that compiles your brainf*ck codes and gives you informations about memory, used cells, dumped version, logs etc...

4 Jun 13, 2021
Do you need a screensaver for CircuitPython? Of course you do

circuitpython_screensaver Do you need a screensaver for CircuitPython? Of course you do Demo video of dvdlogo screensaver: screensaver_dvdlogo.mp4 Dem

Tod E. Kurt 8 Sep 02, 2021
Kubernetes-native workflow automation platform for complex, mission-critical data and ML processes at scale. It has been battle-tested at Lyft, Spotify, Freenome, and others and is truly open-source.

Flyte Flyte is a workflow automation platform for complex, mission-critical data, and ML processes at scale Home Page · Quick Start · Documentation ·

Flyte 3k Jan 01, 2023