Napari plugin for iteratively improving 3D instance segmentation of cells (u-net x watershed)

Last update: May 16, 2022

Related tags

Image Processing iterseg

Overview

iterseg

napari plugin for iteratively improving unet-watershed segmentation

This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.

Installation

You can install iterseg via pip:

pip install iterseg

To install latest development version :

pip install git+https://github.com/abigailmcgovern/iterseg.git

Contributing

Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

License

Distributed under the terms of the BSD-3 license, "iterseg" is free and open source software

Issues

If you encounter any problems, please file an issue along with a detailed description.

Owner

Abigail McGovern

PhD Student or 18th Century porcelain cabbage art.

GitHub Repository

Simple Python package to convert an image into a quantized image using a customizable palette

Simple Python package to convert an image into a quantized image using a customizable palette. Resulting image can be displayed by ePaper displays such as Waveshare displays.

3 Apr 13, 2022

python binding for libvips using cffi

README PyPI package: https://pypi.python.org/pypi/pyvips conda package: https://anaconda.org/conda-forge/pyvips We have formatted docs online here: ht

467 Dec 30, 2022

Semi-hash-based Image Generator

pixel-planet Semi-hash-based Image Generator Utilizable for NFTs Generation Process Input is salted and hashed Colors (background, planet, stars) are

3 Sep 01, 2022

A proof-of-concept implementation of a parallel-decodable PNG format

mtpng A parallelized PNG encoder in Rust by Brion Vibber [email protected] Backgrou

193 Dec 16, 2022

A Python package implementing various CFA (Colour Filter Array) demosaicing algorithms and related utilities.

Colour - Demosaicing A Python package implementing various CFA (Colour Filter Array) demosaicing algorithms and related utilities. It is open source a

218 Dec 04, 2022

imgAnalyser - Un script pour obtenir la liste des pixels d'une image correspondant à plusieurs couleurs

imgAnalyser - Un script pour obtenir la liste des pixels d'une image correspondant à plusieurs couleurs Ce script à pour but, à partir d'une image, de

1 Nov 15, 2021

Design custom QR codes with this web app!

My-QR.Art This web app lets users design their own QR codes to any domain. It can be acessed on my-qr.art. You can find some more background info abou

406 Dec 20, 2022

Alternate Python bindings for the Open Asset Import Library (ASSIMP)

Impasse A simple Python wrapper for assimp using cffi to access the library. Requires Python = 3.7. It's a fork of PyAssimp, Assimp's official Python

3 Sep 26, 2022

🛹 Turn an SVG into an STL for stencil creation purposes

svg2stl This repository provides a script which takes as input an SVG such as this one: It outputs an STL file like this one: You can also see an inte

3 Dec 29, 2021

Avatar Generator Python

This is a simple avatar generator project which uses your webcam to take pictures and saves five different types of your images into your device including the original image.

3 Jan 23, 2022

Conversion of Image, video, text into ASCII format

asciju Python package that converts image to ascii Free software: MIT license

11 Aug 22, 2022

Tool to create a Phunk image with a custom background

Create Phunk image Tool to create a Phunk image with a custom background Installation Clone the repo git clone https://github.com/albanow/etherscan_sa

6 Mar 31, 2022

The following program is used to swap the faces from two images.

Face-Swapping The following program is used to swap the faces from two images. In today's world deep fake technology has become really popular . As a

1 Jan 19, 2022

The InvGears workbench for FreeCAD allows the creation of gear systems

FreeCAD InvGears workbench Current version 0.1.1 Overview The InvGears workbench allows the creation of gear systems. The gear generation algorithm is

8 Dec 10, 2021

Polyfoto - Create image mosaics.

Polyfoto Create image mosaics. Showcase "Before and After Science" by Brian Eno "Scott 3" by Scott Walker Installation Clone this repository to your l

149 Dec 25, 2022

🎶😤 Generate an image indicating what you are listening to 😳

I'm Listening to This (song that I've sent you an image about detailing its metadata in a nifty way) Few lines describing your project. 📝 Table of Co

4 Nov 03, 2021

Seaborn-image is a Python image visualization library based on matplotlib and provides a high-level API to draw attractive and informative images quickly and effectively.

seaborn-image: image data visualization Description Seaborn-image is a Python image visualization library based on matplotlib and provides a high-leve

48 Jan 05, 2023